FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635343_a_at:

>probe:Drosophila_2:1635343_a_at:421:403; Interrogation_Position=1096; Antisense; GACTGTTGAATCTCACGACACGGCA
>probe:Drosophila_2:1635343_a_at:694:237; Interrogation_Position=1104; Antisense; AATCTCACGACACGGCAGCAGTTGA
>probe:Drosophila_2:1635343_a_at:717:265; Interrogation_Position=1144; Antisense; CAGTCAAGACGATGTGGACCCCAAA
>probe:Drosophila_2:1635343_a_at:518:63; Interrogation_Position=1155; Antisense; ATGTGGACCCCAAAGTAGTCGCTTC
>probe:Drosophila_2:1635343_a_at:15:33; Interrogation_Position=1172; Antisense; GTCGCTTCCTTACAAAATTCACTGA
>probe:Drosophila_2:1635343_a_at:516:245; Interrogation_Position=1187; Antisense; AATTCACTGAAATCCATCGACTGTA
>probe:Drosophila_2:1635343_a_at:285:407; Interrogation_Position=1205; Antisense; GACTGTAAAAATATGGCCTTGGCCT
>probe:Drosophila_2:1635343_a_at:65:577; Interrogation_Position=1219; Antisense; GGCCTTGGCCTACGTGAAGGTCTTA
>probe:Drosophila_2:1635343_a_at:667:79; Interrogation_Position=1236; Antisense; AGGTCTTACAGGAGTACGCCATGTT
>probe:Drosophila_2:1635343_a_at:400:639; Interrogation_Position=1273; Antisense; TCGGGCCATTGGACTACTTACTGAA
>probe:Drosophila_2:1635343_a_at:510:239; Interrogation_Position=1305; Antisense; AATCAGTTTTAAATCCGCCTCAGAA
>probe:Drosophila_2:1635343_a_at:472:453; Interrogation_Position=1340; Antisense; GATCTATGATCTTATTGACGCCACA
>probe:Drosophila_2:1635343_a_at:377:109; Interrogation_Position=849; Antisense; AGAATCGTCCATCCAAACTTTGTAA
>probe:Drosophila_2:1635343_a_at:120:489; Interrogation_Position=971; Antisense; GTACGCGTGCGTACGGATTCTGAAG

Paste this into a BLAST search page for me
GACTGTTGAATCTCACGACACGGCAAATCTCACGACACGGCAGCAGTTGACAGTCAAGACGATGTGGACCCCAAAATGTGGACCCCAAAGTAGTCGCTTCGTCGCTTCCTTACAAAATTCACTGAAATTCACTGAAATCCATCGACTGTAGACTGTAAAAATATGGCCTTGGCCTGGCCTTGGCCTACGTGAAGGTCTTAAGGTCTTACAGGAGTACGCCATGTTTCGGGCCATTGGACTACTTACTGAAAATCAGTTTTAAATCCGCCTCAGAAGATCTATGATCTTATTGACGCCACAAGAATCGTCCATCCAAACTTTGTAAGTACGCGTGCGTACGGATTCTGAAG

Full Affymetrix probeset data:

Annotations for 1635343_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720