FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635546_a_at:

>probe:Drosophila_2:1635546_a_at:540:249; Interrogation_Position=6060; Antisense; CAATCGATCCGATTCAACGGGCAGT
>probe:Drosophila_2:1635546_a_at:652:417; Interrogation_Position=6154; Antisense; GAGCGGTTGCATATCACCAGTCAGC
>probe:Drosophila_2:1635546_a_at:421:211; Interrogation_Position=6187; Antisense; AAGAACTCGATGACCACATTGCCAC
>probe:Drosophila_2:1635546_a_at:539:257; Interrogation_Position=6209; Antisense; CACATGCCGGTCAACTGGGTCAGTT
>probe:Drosophila_2:1635546_a_at:408:511; Interrogation_Position=6257; Antisense; GTGAGGCCACCAAATCGTCCAGTTT
>probe:Drosophila_2:1635546_a_at:320:479; Interrogation_Position=6278; Antisense; GTTTCTTTGCCCAGCTGAACAGCGA
>probe:Drosophila_2:1635546_a_at:712:463; Interrogation_Position=6303; Antisense; GATTGGTCAGTTCCATTATCCGACA
>probe:Drosophila_2:1635546_a_at:38:685; Interrogation_Position=6319; Antisense; TATCCGACAATAAACGCTGCAGCCG
>probe:Drosophila_2:1635546_a_at:510:119; Interrogation_Position=6348; Antisense; AGCTGCCCTGCATGGCTATGGACAT
>probe:Drosophila_2:1635546_a_at:369:99; Interrogation_Position=6428; Antisense; AGATGCATCATCATCATGGCGGCGC
>probe:Drosophila_2:1635546_a_at:525:87; Interrogation_Position=6460; Antisense; AGTCCGTCGGCCATGATGAGCCAAA
>probe:Drosophila_2:1635546_a_at:77:379; Interrogation_Position=6501; Antisense; GAAGCTGTTGCCGTTCAATAACCAA
>probe:Drosophila_2:1635546_a_at:35:207; Interrogation_Position=6524; Antisense; AAGCGAATGCCGTCTACGAGGTACA
>probe:Drosophila_2:1635546_a_at:590:73; Interrogation_Position=6560; Antisense; AGGAACAGGTCCTGTGTCCGCAGAC

Paste this into a BLAST search page for me
CAATCGATCCGATTCAACGGGCAGTGAGCGGTTGCATATCACCAGTCAGCAAGAACTCGATGACCACATTGCCACCACATGCCGGTCAACTGGGTCAGTTGTGAGGCCACCAAATCGTCCAGTTTGTTTCTTTGCCCAGCTGAACAGCGAGATTGGTCAGTTCCATTATCCGACATATCCGACAATAAACGCTGCAGCCGAGCTGCCCTGCATGGCTATGGACATAGATGCATCATCATCATGGCGGCGCAGTCCGTCGGCCATGATGAGCCAAAGAAGCTGTTGCCGTTCAATAACCAAAAGCGAATGCCGTCTACGAGGTACAAGGAACAGGTCCTGTGTCCGCAGAC

Full Affymetrix probeset data:

Annotations for 1635546_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720