FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635591_at:

>probe:Drosophila_2:1635591_at:512:711; Interrogation_Position=1057; Antisense; TTCACTCAGCGACTCATTTTTCTAA
>probe:Drosophila_2:1635591_at:599:165; Interrogation_Position=1107; Antisense; AAATCCCACGAGCATTTCTCGCTTA
>probe:Drosophila_2:1635591_at:726:585; Interrogation_Position=566; Antisense; TGGACCCGGTTTTGTGACGATCAAC
>probe:Drosophila_2:1635591_at:19:425; Interrogation_Position=597; Antisense; GAGACACCCATACCCGATGTGAATG
>probe:Drosophila_2:1635591_at:29:565; Interrogation_Position=651; Antisense; GGAATGATGGACCTGGCACTTCTCT
>probe:Drosophila_2:1635591_at:689:147; Interrogation_Position=668; Antisense; ACTTCTCTCCGCGAATGCAAATCAA
>probe:Drosophila_2:1635591_at:636:239; Interrogation_Position=687; Antisense; AATCAATTGCGTTATGTTCTGGAGA
>probe:Drosophila_2:1635591_at:65:419; Interrogation_Position=713; Antisense; GAGCTCACAACATCCTTACTTTTAT
>probe:Drosophila_2:1635591_at:659:667; Interrogation_Position=729; Antisense; TACTTTTATCCCAGTCTGCTGTTCA
>probe:Drosophila_2:1635591_at:370:537; Interrogation_Position=828; Antisense; GGTCACGATATCTGCCGGGCGAACA
>probe:Drosophila_2:1635591_at:625:331; Interrogation_Position=874; Antisense; GCGGCATTTTTATAGTCACTGTGGT
>probe:Drosophila_2:1635591_at:357:23; Interrogation_Position=909; Antisense; ATATCAGCCTTTACTGTGGACAGAG
>probe:Drosophila_2:1635591_at:642:153; Interrogation_Position=928; Antisense; ACAGAGATACTGTGCCTGCTTTACC
>probe:Drosophila_2:1635591_at:479:603; Interrogation_Position=944; Antisense; TGCTTTACCCGCCAATACAACATAG

Paste this into a BLAST search page for me
TTCACTCAGCGACTCATTTTTCTAAAAATCCCACGAGCATTTCTCGCTTATGGACCCGGTTTTGTGACGATCAACGAGACACCCATACCCGATGTGAATGGGAATGATGGACCTGGCACTTCTCTACTTCTCTCCGCGAATGCAAATCAAAATCAATTGCGTTATGTTCTGGAGAGAGCTCACAACATCCTTACTTTTATTACTTTTATCCCAGTCTGCTGTTCAGGTCACGATATCTGCCGGGCGAACAGCGGCATTTTTATAGTCACTGTGGTATATCAGCCTTTACTGTGGACAGAGACAGAGATACTGTGCCTGCTTTACCTGCTTTACCCGCCAATACAACATAG

Full Affymetrix probeset data:

Annotations for 1635591_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720