FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635631_a_at:

>probe:Drosophila_2:1635631_a_at:55:45; Interrogation_Position=3775; Antisense; ATCGCTGGCCGTAGACTTAATCTTT
>probe:Drosophila_2:1635631_a_at:173:655; Interrogation_Position=3792; Antisense; TAATCTTTACGCACAGAGCTCGCAG
>probe:Drosophila_2:1635631_a_at:325:635; Interrogation_Position=3811; Antisense; TCGCAGTCCACGTTCCTGAAGATTG
>probe:Drosophila_2:1635631_a_at:681:613; Interrogation_Position=3827; Antisense; TGAAGATTGCCTCTGTTGGCCACCA
>probe:Drosophila_2:1635631_a_at:11:333; Interrogation_Position=3855; Antisense; GCTGGCCTACCTAGACAACCTGAAG
>probe:Drosophila_2:1635631_a_at:480:107; Interrogation_Position=3893; Antisense; AGAACAACATTCAGATCGCGGCCAC
>probe:Drosophila_2:1635631_a_at:619:137; Interrogation_Position=3926; Antisense; ACGAGATCGATGTGGCTGCCCTGGA
>probe:Drosophila_2:1635631_a_at:389:573; Interrogation_Position=3953; Antisense; GGCTGTTGTCGCATGCCTACAAATA
>probe:Drosophila_2:1635631_a_at:290:665; Interrogation_Position=3970; Antisense; TACAAATACCTTTGCCGGCGCGAGT
>probe:Drosophila_2:1635631_a_at:511:119; Interrogation_Position=4001; Antisense; AGCTGCCCATCATTGGCCAGATGTA
>probe:Drosophila_2:1635631_a_at:200:135; Interrogation_Position=4028; Antisense; ACGCCGTGCGTATCCTGCAGAATTA
>probe:Drosophila_2:1635631_a_at:180:701; Interrogation_Position=4136; Antisense; TTGTTAAAGCACCACATGCGGTCCC
>probe:Drosophila_2:1635631_a_at:630:51; Interrogation_Position=4151; Antisense; ATGCGGTCCCATTAATTGTCTTATA
>probe:Drosophila_2:1635631_a_at:446:543; Interrogation_Position=4242; Antisense; GGATACTAAGATCTGCACCGATAGG

Paste this into a BLAST search page for me
ATCGCTGGCCGTAGACTTAATCTTTTAATCTTTACGCACAGAGCTCGCAGTCGCAGTCCACGTTCCTGAAGATTGTGAAGATTGCCTCTGTTGGCCACCAGCTGGCCTACCTAGACAACCTGAAGAGAACAACATTCAGATCGCGGCCACACGAGATCGATGTGGCTGCCCTGGAGGCTGTTGTCGCATGCCTACAAATATACAAATACCTTTGCCGGCGCGAGTAGCTGCCCATCATTGGCCAGATGTAACGCCGTGCGTATCCTGCAGAATTATTGTTAAAGCACCACATGCGGTCCCATGCGGTCCCATTAATTGTCTTATAGGATACTAAGATCTGCACCGATAGG

Full Affymetrix probeset data:

Annotations for 1635631_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720