FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635639_a_at:

>probe:Drosophila_2:1635639_a_at:448:609; Interrogation_Position=5946; Antisense; TGAGCCCTCGTTTAAGCAGTCTTAG
>probe:Drosophila_2:1635639_a_at:41:375; Interrogation_Position=5970; Antisense; GAACACCAAACCAAACTCAAGTCTC
>probe:Drosophila_2:1635639_a_at:662:249; Interrogation_Position=5987; Antisense; CAAGTCTCTCGATCTGAAGTTTATT
>probe:Drosophila_2:1635639_a_at:391:481; Interrogation_Position=6036; Antisense; GTATTCTTGTTAACGTCACACTGCC
>probe:Drosophila_2:1635639_a_at:290:495; Interrogation_Position=6050; Antisense; GTCACACTGCCACAAATCGAAACAA
>probe:Drosophila_2:1635639_a_at:451:367; Interrogation_Position=6110; Antisense; GAACCAAACCGAGATACTGACCCAT
>probe:Drosophila_2:1635639_a_at:407:455; Interrogation_Position=6122; Antisense; GATACTGACCCATAGTTTCAACAAT
>probe:Drosophila_2:1635639_a_at:301:479; Interrogation_Position=6136; Antisense; GTTTCAACAATACTGCAACCGCAAT
>probe:Drosophila_2:1635639_a_at:592:359; Interrogation_Position=6150; Antisense; GCAACCGCAATCCTCAATGCAATAT
>probe:Drosophila_2:1635639_a_at:418:615; Interrogation_Position=6167; Antisense; TGCAATATACCGACAACTTCTACAA
>probe:Drosophila_2:1635639_a_at:557:663; Interrogation_Position=6187; Antisense; TACAACAATTTCCAAACACTGCCCA
>probe:Drosophila_2:1635639_a_at:413:283; Interrogation_Position=6205; Antisense; CTGCCCAAAACGTGCAATCTCTTGA
>probe:Drosophila_2:1635639_a_at:121:95; Interrogation_Position=6294; Antisense; AGTTGCGTTCTCTAAGTACCTTTAT
>probe:Drosophila_2:1635639_a_at:394:429; Interrogation_Position=6422; Antisense; GAGTTCAACTCTGTTCATTGTAAAC

Paste this into a BLAST search page for me
TGAGCCCTCGTTTAAGCAGTCTTAGGAACACCAAACCAAACTCAAGTCTCCAAGTCTCTCGATCTGAAGTTTATTGTATTCTTGTTAACGTCACACTGCCGTCACACTGCCACAAATCGAAACAAGAACCAAACCGAGATACTGACCCATGATACTGACCCATAGTTTCAACAATGTTTCAACAATACTGCAACCGCAATGCAACCGCAATCCTCAATGCAATATTGCAATATACCGACAACTTCTACAATACAACAATTTCCAAACACTGCCCACTGCCCAAAACGTGCAATCTCTTGAAGTTGCGTTCTCTAAGTACCTTTATGAGTTCAACTCTGTTCATTGTAAAC

Full Affymetrix probeset data:

Annotations for 1635639_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720