FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635696_s_at:

>probe:Drosophila_2:1635696_s_at:516:71; Interrogation_Position=5867; Antisense; AGGACATACCACCACAAACTGGAAT
>probe:Drosophila_2:1635696_s_at:461:375; Interrogation_Position=5893; Antisense; GAAGAAGTTCCACTACCCTTACTAT
>probe:Drosophila_2:1635696_s_at:314:373; Interrogation_Position=5963; Antisense; GAAGTGACGTATTCACGCCAACTCA
>probe:Drosophila_2:1635696_s_at:65:313; Interrogation_Position=5979; Antisense; GCCAACTCATCACGCTCAGTTAATT
>probe:Drosophila_2:1635696_s_at:196:655; Interrogation_Position=5999; Antisense; TAATTGAATATTCGCGCCACCCAAA
>probe:Drosophila_2:1635696_s_at:43:257; Interrogation_Position=6020; Antisense; CAAACTGGGCCGCTCTTGTAAACGG
>probe:Drosophila_2:1635696_s_at:559:719; Interrogation_Position=6035; Antisense; TTGTAAACGGATTCCCAAGCTCTCC
>probe:Drosophila_2:1635696_s_at:290:207; Interrogation_Position=6051; Antisense; AAGCTCTCCTCAACGTAAACATCCA
>probe:Drosophila_2:1635696_s_at:615:475; Interrogation_Position=6116; Antisense; GTTATCTGCGTGTCGATCGTTATTA
>probe:Drosophila_2:1635696_s_at:387:599; Interrogation_Position=6126; Antisense; TGTCGATCGTTATTACTTCACTTCA
>probe:Drosophila_2:1635696_s_at:659:17; Interrogation_Position=6188; Antisense; ATTTCTGTAACCCATAGAGGCCCCT
>probe:Drosophila_2:1635696_s_at:272:307; Interrogation_Position=6213; Antisense; CCTCAATTCTCACTCACATTTGTAA
>probe:Drosophila_2:1635696_s_at:513:289; Interrogation_Position=6336; Antisense; CGGAGTTGATCCTAGTTTAAATACG
>probe:Drosophila_2:1635696_s_at:718:17; Interrogation_Position=6393; Antisense; ATTTAACTTTCAGCGTTGATCTTAG

Paste this into a BLAST search page for me
AGGACATACCACCACAAACTGGAATGAAGAAGTTCCACTACCCTTACTATGAAGTGACGTATTCACGCCAACTCAGCCAACTCATCACGCTCAGTTAATTTAATTGAATATTCGCGCCACCCAAACAAACTGGGCCGCTCTTGTAAACGGTTGTAAACGGATTCCCAAGCTCTCCAAGCTCTCCTCAACGTAAACATCCAGTTATCTGCGTGTCGATCGTTATTATGTCGATCGTTATTACTTCACTTCAATTTCTGTAACCCATAGAGGCCCCTCCTCAATTCTCACTCACATTTGTAACGGAGTTGATCCTAGTTTAAATACGATTTAACTTTCAGCGTTGATCTTAG

Full Affymetrix probeset data:

Annotations for 1635696_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720