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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635741_a_at:

>probe:Drosophila_2:1635741_a_at:404:23; Interrogation_Position=1887; Antisense; ATATCAGAATCCCTTCTCGCGTGGT
>probe:Drosophila_2:1635741_a_at:303:589; Interrogation_Position=1908; Antisense; TGGTCCCATCCTGAATTTACTCGAA
>probe:Drosophila_2:1635741_a_at:522:695; Interrogation_Position=1923; Antisense; TTTACTCGAATTCTTTGTCTGCCTG
>probe:Drosophila_2:1635741_a_at:547:445; Interrogation_Position=1960; Antisense; GATGACAACGATCTCCTGCTGGAGG
>probe:Drosophila_2:1635741_a_at:451:657; Interrogation_Position=1997; Antisense; TAAGGATCTAGGATCGAGCCCCTGC
>probe:Drosophila_2:1635741_a_at:357:253; Interrogation_Position=2031; Antisense; CAAGCTGCCCGTGCGTGGATAATGT
>probe:Drosophila_2:1635741_a_at:67:681; Interrogation_Position=2086; Antisense; TAGGCTGCCAGTTTGGTTTTGCTCC
>probe:Drosophila_2:1635741_a_at:73:71; Interrogation_Position=2113; Antisense; AGGCTTACTGCTTACTCGAATGCTT
>probe:Drosophila_2:1635741_a_at:64:381; Interrogation_Position=2146; Antisense; GAACCAAAGGTCGTCAAGTGCGTGT
>probe:Drosophila_2:1635741_a_at:2:463; Interrogation_Position=2269; Antisense; GATTCCATTATTGTTAACGGCTCCA
>probe:Drosophila_2:1635741_a_at:574:707; Interrogation_Position=2282; Antisense; TTAACGGCTCCAAATCAATTCCTTC
>probe:Drosophila_2:1635741_a_at:315:245; Interrogation_Position=2298; Antisense; AATTCCTTCCGCAATGGTGTTCAAA
>probe:Drosophila_2:1635741_a_at:238:533; Interrogation_Position=2313; Antisense; GGTGTTCAAAGCATCGGCCAGCCGT
>probe:Drosophila_2:1635741_a_at:90:359; Interrogation_Position=2385; Antisense; GAATACGCTTCTCTTGTTAGTTTTT

Paste this into a BLAST search page for me
ATATCAGAATCCCTTCTCGCGTGGTTGGTCCCATCCTGAATTTACTCGAATTTACTCGAATTCTTTGTCTGCCTGGATGACAACGATCTCCTGCTGGAGGTAAGGATCTAGGATCGAGCCCCTGCCAAGCTGCCCGTGCGTGGATAATGTTAGGCTGCCAGTTTGGTTTTGCTCCAGGCTTACTGCTTACTCGAATGCTTGAACCAAAGGTCGTCAAGTGCGTGTGATTCCATTATTGTTAACGGCTCCATTAACGGCTCCAAATCAATTCCTTCAATTCCTTCCGCAATGGTGTTCAAAGGTGTTCAAAGCATCGGCCAGCCGTGAATACGCTTCTCTTGTTAGTTTTT

Full Affymetrix probeset data:

Annotations for 1635741_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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