FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635854_s_at:

>probe:Drosophila_2:1635854_s_at:581:209; Interrogation_Position=4930; Antisense; AAGCAATTGGGATTGGGAGTTCCTA
>probe:Drosophila_2:1635854_s_at:348:527; Interrogation_Position=4944; Antisense; GGGAGTTCCTATTTGTTTCGAATTG
>probe:Drosophila_2:1635854_s_at:309:401; Interrogation_Position=4968; Antisense; GACATGGAAACTATAATTGACGCAA
>probe:Drosophila_2:1635854_s_at:540:723; Interrogation_Position=4984; Antisense; TTGACGCAACTAAATGTGGAAACTT
>probe:Drosophila_2:1635854_s_at:241:149; Interrogation_Position=5005; Antisense; ACTTAGCTCGGTTTATAAATCACAG
>probe:Drosophila_2:1635854_s_at:634:661; Interrogation_Position=5020; Antisense; TAAATCACAGTTGCAATCCGAATTG
>probe:Drosophila_2:1635854_s_at:57:47; Interrogation_Position=5035; Antisense; ATCCGAATTGCTACGCTAAGGTTAT
>probe:Drosophila_2:1635854_s_at:317:209; Interrogation_Position=5097; Antisense; AAGCAACCCATTGGTATCAACGAGG
>probe:Drosophila_2:1635854_s_at:404:253; Interrogation_Position=5114; Antisense; CAACGAGGAAATAACTTACGACTAT
>probe:Drosophila_2:1635854_s_at:19:671; Interrogation_Position=5130; Antisense; TACGACTATAAATTTCCACTAGAAG
>probe:Drosophila_2:1635854_s_at:259:181; Interrogation_Position=5159; Antisense; AAAAATACCTTGTCTATGCGGCGCC
>probe:Drosophila_2:1635854_s_at:215:23; Interrogation_Position=5346; Antisense; ATATCAACGAGGTCAGAGGTGCTGT
>probe:Drosophila_2:1635854_s_at:515:533; Interrogation_Position=5363; Antisense; GGTGCTGTTCAAAATGGTTTAGGTC
>probe:Drosophila_2:1635854_s_at:677:175; Interrogation_Position=5436; Antisense; AAACCCATTTGATCTGTAAACACGA

Paste this into a BLAST search page for me
AAGCAATTGGGATTGGGAGTTCCTAGGGAGTTCCTATTTGTTTCGAATTGGACATGGAAACTATAATTGACGCAATTGACGCAACTAAATGTGGAAACTTACTTAGCTCGGTTTATAAATCACAGTAAATCACAGTTGCAATCCGAATTGATCCGAATTGCTACGCTAAGGTTATAAGCAACCCATTGGTATCAACGAGGCAACGAGGAAATAACTTACGACTATTACGACTATAAATTTCCACTAGAAGAAAAATACCTTGTCTATGCGGCGCCATATCAACGAGGTCAGAGGTGCTGTGGTGCTGTTCAAAATGGTTTAGGTCAAACCCATTTGATCTGTAAACACGA

Full Affymetrix probeset data:

Annotations for 1635854_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720