FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635913_at:

>probe:Drosophila_2:1635913_at:697:487; Interrogation_Position=1025; Antisense; GTACGAGGCGATGGCCACCTTTGTG
>probe:Drosophila_2:1635913_at:260:421; Interrogation_Position=1062; Antisense; GAGCACTCCTGCAGATTCAAGACCA
>probe:Drosophila_2:1635913_at:525:295; Interrogation_Position=1094; Antisense; CGACGTGCTCACGTTCGACAATTTG
>probe:Drosophila_2:1635913_at:96:243; Interrogation_Position=1113; Antisense; AATTTGCGCCTGGTCCACGGACGTA
>probe:Drosophila_2:1635913_at:137:531; Interrogation_Position=1140; Antisense; GGGTACGACGACACGGACCGCAATG
>probe:Drosophila_2:1635913_at:620:321; Interrogation_Position=1180; Antisense; GCGCCTTCGTTGACTGGGACATTGT
>probe:Drosophila_2:1635913_at:27:529; Interrogation_Position=1195; Antisense; GGGACATTGTGTACTCGCGCCTGAG
>probe:Drosophila_2:1635913_at:329:81; Interrogation_Position=1218; Antisense; AGGGTCCTGCGGAATGCCAAAGCCA
>probe:Drosophila_2:1635913_at:534:173; Interrogation_Position=1236; Antisense; AAAGCCACCTGATGCTCCTTAGATA
>probe:Drosophila_2:1635913_at:444:407; Interrogation_Position=885; Antisense; GACGGCGATCTGCAGTTTCACAATA
>probe:Drosophila_2:1635913_at:462:685; Interrogation_Position=908; Antisense; TATCTGGAGGGCACCGGTCATCAAC
>probe:Drosophila_2:1635913_at:714:645; Interrogation_Position=925; Antisense; TCATCAACTTGGACGCGGAGGGCCG
>probe:Drosophila_2:1635913_at:181:83; Interrogation_Position=943; Antisense; AGGGCCGGTGTGTGCGCATCAACCA
>probe:Drosophila_2:1635913_at:171:153; Interrogation_Position=985; Antisense; ACAGCCACTTTAGCGTGCCGGTGGA

Paste this into a BLAST search page for me
GTACGAGGCGATGGCCACCTTTGTGGAGCACTCCTGCAGATTCAAGACCACGACGTGCTCACGTTCGACAATTTGAATTTGCGCCTGGTCCACGGACGTAGGGTACGACGACACGGACCGCAATGGCGCCTTCGTTGACTGGGACATTGTGGGACATTGTGTACTCGCGCCTGAGAGGGTCCTGCGGAATGCCAAAGCCAAAAGCCACCTGATGCTCCTTAGATAGACGGCGATCTGCAGTTTCACAATATATCTGGAGGGCACCGGTCATCAACTCATCAACTTGGACGCGGAGGGCCGAGGGCCGGTGTGTGCGCATCAACCAACAGCCACTTTAGCGTGCCGGTGGA

Full Affymetrix probeset data:

Annotations for 1635913_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720