FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635939_a_at:

>probe:Drosophila_2:1635939_a_at:54:471; Interrogation_Position=1350; Antisense; GTTCGCAGCTCAGAGGCTAGGTCCA
>probe:Drosophila_2:1635939_a_at:200:505; Interrogation_Position=1370; Antisense; GTCCACCGCCGAGTTATCTGAAATT
>probe:Drosophila_2:1635939_a_at:129:99; Interrogation_Position=1406; Antisense; AGAGGACGGCGAAGAGTTCATTTCT
>probe:Drosophila_2:1635939_a_at:262:429; Interrogation_Position=1419; Antisense; GAGTTCATTTCTCATCTTGATCTGA
>probe:Drosophila_2:1635939_a_at:545:35; Interrogation_Position=1432; Antisense; ATCTTGATCTGACCGTTGTGGACGA
>probe:Drosophila_2:1635939_a_at:251:61; Interrogation_Position=1588; Antisense; ATGTAGAGGTCACTCCTGAAGCGGA
>probe:Drosophila_2:1635939_a_at:581:75; Interrogation_Position=1618; Antisense; AGGAGTGCGAAGAGCCTCATCAGGA
>probe:Drosophila_2:1635939_a_at:458:361; Interrogation_Position=1649; Antisense; GAATTGCAACGCTGAGGTGGTTAAT
>probe:Drosophila_2:1635939_a_at:680:471; Interrogation_Position=1668; Antisense; GTTAATGAAGACACATGCTCCTTGT
>probe:Drosophila_2:1635939_a_at:613:51; Interrogation_Position=1682; Antisense; ATGCTCCTTGTAAGCAAGCCGATGG
>probe:Drosophila_2:1635939_a_at:9:205; Interrogation_Position=1697; Antisense; AAGCCGATGGGTAACGGGATTCATG
>probe:Drosophila_2:1635939_a_at:63:401; Interrogation_Position=1791; Antisense; GACAGCAGTATCGTGCAGCTTCACA
>probe:Drosophila_2:1635939_a_at:403:93; Interrogation_Position=1838; Antisense; AGTTCATACTGCCTCAAGTCGACAT
>probe:Drosophila_2:1635939_a_at:195:149; Interrogation_Position=1913; Antisense; ACTTCTCAATAAACACTCACTACCA

Paste this into a BLAST search page for me
GTTCGCAGCTCAGAGGCTAGGTCCAGTCCACCGCCGAGTTATCTGAAATTAGAGGACGGCGAAGAGTTCATTTCTGAGTTCATTTCTCATCTTGATCTGAATCTTGATCTGACCGTTGTGGACGAATGTAGAGGTCACTCCTGAAGCGGAAGGAGTGCGAAGAGCCTCATCAGGAGAATTGCAACGCTGAGGTGGTTAATGTTAATGAAGACACATGCTCCTTGTATGCTCCTTGTAAGCAAGCCGATGGAAGCCGATGGGTAACGGGATTCATGGACAGCAGTATCGTGCAGCTTCACAAGTTCATACTGCCTCAAGTCGACATACTTCTCAATAAACACTCACTACCA

Full Affymetrix probeset data:

Annotations for 1635939_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720