FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635943_s_at:

>probe:Drosophila_2:1635943_s_at:144:451; Interrogation_Position=1155; Antisense; GATCGCAGGCAGAGCAGGCCAAGTT
>probe:Drosophila_2:1635943_s_at:655:69; Interrogation_Position=1170; Antisense; AGGCCAAGTTCGACTTCATCCTCTG
>probe:Drosophila_2:1635943_s_at:289:533; Interrogation_Position=1234; Antisense; GGTGGACACCATCTGGTACTATCTG
>probe:Drosophila_2:1635943_s_at:150:529; Interrogation_Position=1267; Antisense; GGGATCGGCCCTGATTATGGCTCCA
>probe:Drosophila_2:1635943_s_at:616:575; Interrogation_Position=1299; Antisense; GGCGCACCTTGAGCGTTTTTCAGGA
>probe:Drosophila_2:1635943_s_at:660:477; Interrogation_Position=1313; Antisense; GTTTTTCAGGACGAGTGCGTGGCCA
>probe:Drosophila_2:1635943_s_at:672:585; Interrogation_Position=1350; Antisense; TGGAGTTGGCCACTCGCTATAACGA
>probe:Drosophila_2:1635943_s_at:241:659; Interrogation_Position=1369; Antisense; TAACGAGACCATCTGGCAGCGGCAT
>probe:Drosophila_2:1635943_s_at:225:121; Interrogation_Position=1386; Antisense; AGCGGCATCTCCAGCTGAAGGCGGA
>probe:Drosophila_2:1635943_s_at:265:539; Interrogation_Position=1499; Antisense; GGTTAGGACTTAATGGCAAGCCACT
>probe:Drosophila_2:1635943_s_at:334:203; Interrogation_Position=1516; Antisense; AAGCCACTTGGCTGCAGTAGGTGCA
>probe:Drosophila_2:1635943_s_at:162:359; Interrogation_Position=1570; Antisense; GCAAGCAAATTCCAGTTTACACCTT
>probe:Drosophila_2:1635943_s_at:433:675; Interrogation_Position=1622; Antisense; TAGAAATTCTCCTGTTGGGCTCGAC
>probe:Drosophila_2:1635943_s_at:657:255; Interrogation_Position=1692; Antisense; CAAACTCGTTAGACTGGTGCTAGAA

Paste this into a BLAST search page for me
GATCGCAGGCAGAGCAGGCCAAGTTAGGCCAAGTTCGACTTCATCCTCTGGGTGGACACCATCTGGTACTATCTGGGGATCGGCCCTGATTATGGCTCCAGGCGCACCTTGAGCGTTTTTCAGGAGTTTTTCAGGACGAGTGCGTGGCCATGGAGTTGGCCACTCGCTATAACGATAACGAGACCATCTGGCAGCGGCATAGCGGCATCTCCAGCTGAAGGCGGAGGTTAGGACTTAATGGCAAGCCACTAAGCCACTTGGCTGCAGTAGGTGCAGCAAGCAAATTCCAGTTTACACCTTTAGAAATTCTCCTGTTGGGCTCGACCAAACTCGTTAGACTGGTGCTAGAA

Full Affymetrix probeset data:

Annotations for 1635943_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720