FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635962_a_at:

>probe:Drosophila_2:1635962_a_at:82:33; Interrogation_Position=1345; Antisense; ATCAATGACCTTCTTTTCAACCTGC
>probe:Drosophila_2:1635962_a_at:415:491; Interrogation_Position=1388; Antisense; GTAAATACACTTGCCATCCATTTGA
>probe:Drosophila_2:1635962_a_at:504:47; Interrogation_Position=1403; Antisense; ATCCATTTGACCTATTGTGCCATTG
>probe:Drosophila_2:1635962_a_at:633:189; Interrogation_Position=1430; Antisense; AACATGTCTGAATACACCGCAGCCA
>probe:Drosophila_2:1635962_a_at:84:263; Interrogation_Position=1449; Antisense; CAGCCACCTGTTTGACAATCCGAAG
>probe:Drosophila_2:1635962_a_at:349:149; Interrogation_Position=1481; Antisense; ACTTCGCCCCAATGCGTGTTGAGGG
>probe:Drosophila_2:1635962_a_at:644:431; Interrogation_Position=1501; Antisense; GAGGGCTCCATTTCAAGTTTGATTA
>probe:Drosophila_2:1635962_a_at:562:13; Interrogation_Position=1522; Antisense; ATTAATTCTTGAGTCTGGCTGGGCA
>probe:Drosophila_2:1635962_a_at:119:171; Interrogation_Position=1557; Antisense; AAAGATACGGCCCAAACTCACCGAG
>probe:Drosophila_2:1635962_a_at:499:259; Interrogation_Position=1575; Antisense; CACCGAGTCCGGCTATGATTTATGA
>probe:Drosophila_2:1635962_a_at:148:187; Interrogation_Position=1622; Antisense; AACACAGTCTGTATGCTAAAGCGAA
>probe:Drosophila_2:1635962_a_at:561:205; Interrogation_Position=1640; Antisense; AAGCGAAGTTGCGAACTCTTGCCGC
>probe:Drosophila_2:1635962_a_at:101:43; Interrogation_Position=1801; Antisense; ATCCCTAAGCGCAAATTCCGACTTC
>probe:Drosophila_2:1635962_a_at:16:305; Interrogation_Position=1836; Antisense; CCGATGCGTTGCTCATTAGCGTGAA

Paste this into a BLAST search page for me
ATCAATGACCTTCTTTTCAACCTGCGTAAATACACTTGCCATCCATTTGAATCCATTTGACCTATTGTGCCATTGAACATGTCTGAATACACCGCAGCCACAGCCACCTGTTTGACAATCCGAAGACTTCGCCCCAATGCGTGTTGAGGGGAGGGCTCCATTTCAAGTTTGATTAATTAATTCTTGAGTCTGGCTGGGCAAAAGATACGGCCCAAACTCACCGAGCACCGAGTCCGGCTATGATTTATGAAACACAGTCTGTATGCTAAAGCGAAAAGCGAAGTTGCGAACTCTTGCCGCATCCCTAAGCGCAAATTCCGACTTCCCGATGCGTTGCTCATTAGCGTGAA

Full Affymetrix probeset data:

Annotations for 1635962_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720