FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635980_s_at:

>probe:Drosophila_2:1635980_s_at:623:271; Interrogation_Position=1784; Antisense; CATACAAAGCTTTAATCTCCGGCCT
>probe:Drosophila_2:1635980_s_at:9:235; Interrogation_Position=1825; Antisense; AATCCCCTCTATCATTTATTGTACG
>probe:Drosophila_2:1635980_s_at:78:489; Interrogation_Position=1845; Antisense; GTACGTCTTTGGTTCGATTTCGATT
>probe:Drosophila_2:1635980_s_at:374:705; Interrogation_Position=1868; Antisense; TTACGATTCTGTTTCGTTTCGCTGT
>probe:Drosophila_2:1635980_s_at:485:479; Interrogation_Position=1883; Antisense; GTTTCGCTGTTAAAATTCCATTCCT
>probe:Drosophila_2:1635980_s_at:235:245; Interrogation_Position=1896; Antisense; AATTCCATTCCTGATTTGACAACCA
>probe:Drosophila_2:1635980_s_at:392:291; Interrogation_Position=1942; Antisense; CGTAGTTTTTAAGCGCGTGTATGTA
>probe:Drosophila_2:1635980_s_at:245:489; Interrogation_Position=2034; Antisense; GTACGTGTAGATCCTAAGTGCGCAA
>probe:Drosophila_2:1635980_s_at:125:323; Interrogation_Position=2053; Antisense; GCGCAATGTTTTTGTTGGCCTTGAC
>probe:Drosophila_2:1635980_s_at:644:607; Interrogation_Position=2074; Antisense; TGACTGTTAGTTAAAGCCTTTCCCT
>probe:Drosophila_2:1635980_s_at:91:663; Interrogation_Position=2127; Antisense; TAAACCAACCCATTGTACTCGTATC
>probe:Drosophila_2:1635980_s_at:292:725; Interrogation_Position=2181; Antisense; TTGTTGACTATTTTATCGCCCTTCC
>probe:Drosophila_2:1635980_s_at:606:655; Interrogation_Position=2240; Antisense; TAAGTTTCCAACTTTGTGTCCAACA
>probe:Drosophila_2:1635980_s_at:234:273; Interrogation_Position=2277; Antisense; CATTCCTTCCAGTTTAGCCTATAGA

Paste this into a BLAST search page for me
CATACAAAGCTTTAATCTCCGGCCTAATCCCCTCTATCATTTATTGTACGGTACGTCTTTGGTTCGATTTCGATTTTACGATTCTGTTTCGTTTCGCTGTGTTTCGCTGTTAAAATTCCATTCCTAATTCCATTCCTGATTTGACAACCACGTAGTTTTTAAGCGCGTGTATGTAGTACGTGTAGATCCTAAGTGCGCAAGCGCAATGTTTTTGTTGGCCTTGACTGACTGTTAGTTAAAGCCTTTCCCTTAAACCAACCCATTGTACTCGTATCTTGTTGACTATTTTATCGCCCTTCCTAAGTTTCCAACTTTGTGTCCAACACATTCCTTCCAGTTTAGCCTATAGA

Full Affymetrix probeset data:

Annotations for 1635980_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720