FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635997_a_at:

>probe:Drosophila_2:1635997_a_at:587:415; Interrogation_Position=4139; Antisense; GAGCGTTACTCAGACTACAGCGACT
>probe:Drosophila_2:1635997_a_at:295:403; Interrogation_Position=4151; Antisense; GACTACAGCGACTACGATGACTACG
>probe:Drosophila_2:1635997_a_at:725:683; Interrogation_Position=4277; Antisense; TATCGCTCGCTATCACCGTCGGACA
>probe:Drosophila_2:1635997_a_at:40:501; Interrogation_Position=4294; Antisense; GTCGGACAGTCGGTACAACTACAAT
>probe:Drosophila_2:1635997_a_at:527:249; Interrogation_Position=4315; Antisense; CAATGACACGGAGACTGACTTCAGT
>probe:Drosophila_2:1635997_a_at:564:633; Interrogation_Position=4385; Antisense; TCGCGACCCTACAGCGAGGTATGAG
>probe:Drosophila_2:1635997_a_at:635:265; Interrogation_Position=4413; Antisense; CAGGGTGTGCCCGTGCAACCAAGTC
>probe:Drosophila_2:1635997_a_at:306:509; Interrogation_Position=4425; Antisense; GTGCAACCAAGTCCTACCAAGTATA
>probe:Drosophila_2:1635997_a_at:311:649; Interrogation_Position=4484; Antisense; TCAACGATTATCGAACGGTGGGATC
>probe:Drosophila_2:1635997_a_at:133:537; Interrogation_Position=4515; Antisense; GGTCGGGACGACCTCTCAAACCGAT
>probe:Drosophila_2:1635997_a_at:338:625; Interrogation_Position=4528; Antisense; TCTCAAACCGATTCCCCAAAACAGG
>probe:Drosophila_2:1635997_a_at:118:453; Interrogation_Position=4553; Antisense; GATCTCAGGAGAGTTCGTGAACAAC
>probe:Drosophila_2:1635997_a_at:567:211; Interrogation_Position=4579; Antisense; AAGAAAACTCCTGTCTCAGCGGTGA
>probe:Drosophila_2:1635997_a_at:709:497; Interrogation_Position=4591; Antisense; GTCTCAGCGGTGAATGATATCCAAG

Paste this into a BLAST search page for me
GAGCGTTACTCAGACTACAGCGACTGACTACAGCGACTACGATGACTACGTATCGCTCGCTATCACCGTCGGACAGTCGGACAGTCGGTACAACTACAATCAATGACACGGAGACTGACTTCAGTTCGCGACCCTACAGCGAGGTATGAGCAGGGTGTGCCCGTGCAACCAAGTCGTGCAACCAAGTCCTACCAAGTATATCAACGATTATCGAACGGTGGGATCGGTCGGGACGACCTCTCAAACCGATTCTCAAACCGATTCCCCAAAACAGGGATCTCAGGAGAGTTCGTGAACAACAAGAAAACTCCTGTCTCAGCGGTGAGTCTCAGCGGTGAATGATATCCAAG

Full Affymetrix probeset data:

Annotations for 1635997_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720