FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636066_s_at:

>probe:Drosophila_2:1636066_s_at:584:427; Interrogation_Position=4403; Antisense; GAGATCATTTCCGACGAGTGGCTGC
>probe:Drosophila_2:1636066_s_at:95:433; Interrogation_Position=4418; Antisense; GAGTGGCTGCCGGAGTGTCTTAACC
>probe:Drosophila_2:1636066_s_at:694:549; Interrogation_Position=4429; Antisense; GGAGTGTCTTAACCGAACGCGTCAG
>probe:Drosophila_2:1636066_s_at:413:381; Interrogation_Position=4443; Antisense; GAACGCGTCAGCACACTAAAGTACT
>probe:Drosophila_2:1636066_s_at:257:181; Interrogation_Position=4495; Antisense; AAAAACTCGCGTGGATAGCCTGCTC
>probe:Drosophila_2:1636066_s_at:320:111; Interrogation_Position=4520; Antisense; AGCACGGCTTTTCGCTTACGCTATG
>probe:Drosophila_2:1636066_s_at:484:683; Interrogation_Position=4535; Antisense; TTACGCTATGACTCCCACTTGTTCG
>probe:Drosophila_2:1636066_s_at:154:725; Interrogation_Position=4553; Antisense; TTGTTCGCCGACGATTATAATGTCA
>probe:Drosophila_2:1636066_s_at:74:655; Interrogation_Position=4570; Antisense; TAATGTCAACGAGCAGCAGGTAGGC
>probe:Drosophila_2:1636066_s_at:98:105; Interrogation_Position=4681; Antisense; AGACGGAAGCAGTAGTTCGCGCAGT
>probe:Drosophila_2:1636066_s_at:185:425; Interrogation_Position=4715; Antisense; GAGACGGTGTCCAGCTATCAGCAGG
>probe:Drosophila_2:1636066_s_at:440:649; Interrogation_Position=4732; Antisense; TCAGCAGGTACTTAGCATCGCCAAG
>probe:Drosophila_2:1636066_s_at:286:189; Interrogation_Position=4767; Antisense; AACAGCGGCGTAAGCATCCGCGAAA
>probe:Drosophila_2:1636066_s_at:131:197; Interrogation_Position=4834; Antisense; AACGGACGCACTGGTGCCCATTTAG

Paste this into a BLAST search page for me
GAGATCATTTCCGACGAGTGGCTGCGAGTGGCTGCCGGAGTGTCTTAACCGGAGTGTCTTAACCGAACGCGTCAGGAACGCGTCAGCACACTAAAGTACTAAAAACTCGCGTGGATAGCCTGCTCAGCACGGCTTTTCGCTTACGCTATGTTACGCTATGACTCCCACTTGTTCGTTGTTCGCCGACGATTATAATGTCATAATGTCAACGAGCAGCAGGTAGGCAGACGGAAGCAGTAGTTCGCGCAGTGAGACGGTGTCCAGCTATCAGCAGGTCAGCAGGTACTTAGCATCGCCAAGAACAGCGGCGTAAGCATCCGCGAAAAACGGACGCACTGGTGCCCATTTAG

Full Affymetrix probeset data:

Annotations for 1636066_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720