FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636068_a_at:

>probe:Drosophila_2:1636068_a_at:517:141; Interrogation_Position=3475; Antisense; ACGGCCAAGCCAACACGATACAATG
>probe:Drosophila_2:1636068_a_at:209:269; Interrogation_Position=3512; Antisense; CAGGCAATCTTGACATCGACTTGTT
>probe:Drosophila_2:1636068_a_at:358:401; Interrogation_Position=3529; Antisense; GACTTGTTGCAGCAGTTGACCTACA
>probe:Drosophila_2:1636068_a_at:461:723; Interrogation_Position=3544; Antisense; TTGACCTACAACCTGTGCCACATGT
>probe:Drosophila_2:1636068_a_at:131:469; Interrogation_Position=3575; Antisense; GTTGCAATCGCTCGGTTTCTTATCC
>probe:Drosophila_2:1636068_a_at:596:17; Interrogation_Position=3611; Antisense; ATTTAGCCCATTTGGTAGCTGCTCG
>probe:Drosophila_2:1636068_a_at:393:585; Interrogation_Position=3636; Antisense; TGGACGCGTTTATCTGACTGGCACC
>probe:Drosophila_2:1636068_a_at:393:405; Interrogation_Position=3651; Antisense; GACTGGCACCAACAGGTTCCTGGAT
>probe:Drosophila_2:1636068_a_at:42:357; Interrogation_Position=3691; Antisense; GCAAAGCGAACGATTGTCCCCGAAT
>probe:Drosophila_2:1636068_a_at:323:181; Interrogation_Position=3725; Antisense; AAAACCCCATGTACTTTGTCTGAGC
>probe:Drosophila_2:1636068_a_at:217:553; Interrogation_Position=3831; Antisense; GGAGCATCTCTATTGATTCCATGAT
>probe:Drosophila_2:1636068_a_at:73:663; Interrogation_Position=3868; Antisense; TAAAAGCCGCCTTGAGATGGTCCGC
>probe:Drosophila_2:1636068_a_at:667:441; Interrogation_Position=3883; Antisense; GATGGTCCGCCAAATATTGTTCTAC
>probe:Drosophila_2:1636068_a_at:455:677; Interrogation_Position=3980; Antisense; TAGAGCGCTCCTTTCTTTTAGGAAT

Paste this into a BLAST search page for me
ACGGCCAAGCCAACACGATACAATGCAGGCAATCTTGACATCGACTTGTTGACTTGTTGCAGCAGTTGACCTACATTGACCTACAACCTGTGCCACATGTGTTGCAATCGCTCGGTTTCTTATCCATTTAGCCCATTTGGTAGCTGCTCGTGGACGCGTTTATCTGACTGGCACCGACTGGCACCAACAGGTTCCTGGATGCAAAGCGAACGATTGTCCCCGAATAAAACCCCATGTACTTTGTCTGAGCGGAGCATCTCTATTGATTCCATGATTAAAAGCCGCCTTGAGATGGTCCGCGATGGTCCGCCAAATATTGTTCTACTAGAGCGCTCCTTTCTTTTAGGAAT

Full Affymetrix probeset data:

Annotations for 1636068_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720