FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636090_a_at:

>probe:Drosophila_2:1636090_a_at:210:17; Interrogation_Position=4147; Antisense; ATTTATTTTTTACCCTGCTTGCTGT
>probe:Drosophila_2:1636090_a_at:239:415; Interrogation_Position=4177; Antisense; GAGCGCTGTAGTTAAGTACGTTACC
>probe:Drosophila_2:1636090_a_at:266:475; Interrogation_Position=4196; Antisense; GTTACCTATTACAACCCAACACTCT
>probe:Drosophila_2:1636090_a_at:287:311; Interrogation_Position=4211; Antisense; CCAACACTCTGCCTTTTGTGGACAT
>probe:Drosophila_2:1636090_a_at:628:245; Interrogation_Position=4247; Antisense; AATTCGAAGTCGTGTGAGCAGCTAA
>probe:Drosophila_2:1636090_a_at:396:497; Interrogation_Position=4306; Antisense; GTCATCTCTTACTCTGGGTTCAAAA
>probe:Drosophila_2:1636090_a_at:341:123; Interrogation_Position=4355; Antisense; AGCGAACTCCTGCTGAATTTTGAAG
>probe:Drosophila_2:1636090_a_at:716:29; Interrogation_Position=4403; Antisense; ATCATCTACTTGAGTGGAACACCGC
>probe:Drosophila_2:1636090_a_at:213:709; Interrogation_Position=4516; Antisense; TTAATGGGCATTGTCGCTCATGGTC
>probe:Drosophila_2:1636090_a_at:633:633; Interrogation_Position=4529; Antisense; TCGCTCATGGTCGTGTAGGTTTTGA
>probe:Drosophila_2:1636090_a_at:377:711; Interrogation_Position=4566; Antisense; TTCTGTTCAGAGCTCGTTGTTAGTC
>probe:Drosophila_2:1636090_a_at:501:217; Interrogation_Position=4611; Antisense; AAGTAGCTGATTATATTCCCCTCCA
>probe:Drosophila_2:1636090_a_at:510:685; Interrogation_Position=4622; Antisense; TATATTCCCCTCCAGACTTTGAAAA
>probe:Drosophila_2:1636090_a_at:40:171; Interrogation_Position=4665; Antisense; AAAGTGTAGCTCTGAATACCCTTTC

Paste this into a BLAST search page for me
ATTTATTTTTTACCCTGCTTGCTGTGAGCGCTGTAGTTAAGTACGTTACCGTTACCTATTACAACCCAACACTCTCCAACACTCTGCCTTTTGTGGACATAATTCGAAGTCGTGTGAGCAGCTAAGTCATCTCTTACTCTGGGTTCAAAAAGCGAACTCCTGCTGAATTTTGAAGATCATCTACTTGAGTGGAACACCGCTTAATGGGCATTGTCGCTCATGGTCTCGCTCATGGTCGTGTAGGTTTTGATTCTGTTCAGAGCTCGTTGTTAGTCAAGTAGCTGATTATATTCCCCTCCATATATTCCCCTCCAGACTTTGAAAAAAAGTGTAGCTCTGAATACCCTTTC

Full Affymetrix probeset data:

Annotations for 1636090_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720