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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636186_s_at:

>probe:Drosophila_2:1636186_s_at:639:101; Interrogation_Position=1012; Antisense; AGAGCGTGCGCAAGCTGTCCGGCTA
>probe:Drosophila_2:1636186_s_at:289:199; Interrogation_Position=1041; Antisense; AACGACCTCGCCAAGCTGATGAAGG
>probe:Drosophila_2:1636186_s_at:154:673; Interrogation_Position=1089; Antisense; TACCTGTTCGACGAGTATCTGCAGA
>probe:Drosophila_2:1636186_s_at:708:665; Interrogation_Position=1169; Antisense; TACACTGTCTCCTCAAAATTGCTCT
>probe:Drosophila_2:1636186_s_at:222:353; Interrogation_Position=1253; Antisense; GCAGCATTATCAAAGCAGCCACAAG
>probe:Drosophila_2:1636186_s_at:101:667; Interrogation_Position=1287; Antisense; TACACCGCGAAATTCACCTTGATTT
>probe:Drosophila_2:1636186_s_at:453:725; Interrogation_Position=1305; Antisense; TTGATTTACCAGCACACCAGATTGT
>probe:Drosophila_2:1636186_s_at:469:31; Interrogation_Position=1346; Antisense; ATAAGTTAGCAAGTTCGCCCCAGCA
>probe:Drosophila_2:1636186_s_at:354:635; Interrogation_Position=1360; Antisense; TCGCCCCAGCAAATGTATCTTTAGT
>probe:Drosophila_2:1636186_s_at:691:481; Interrogation_Position=1383; Antisense; GTATGTACGTTACCGCTTGAACAAA
>probe:Drosophila_2:1636186_s_at:704:643; Interrogation_Position=845; Antisense; TCTTGAGGTCGACGAACTGCACTCC
>probe:Drosophila_2:1636186_s_at:233:573; Interrogation_Position=872; Antisense; GGCTCTGGCTCTGGACACCGAGAAG
>probe:Drosophila_2:1636186_s_at:623:581; Interrogation_Position=970; Antisense; TGGCCCACTACTTCGAGGAGAACTT
>probe:Drosophila_2:1636186_s_at:592:191; Interrogation_Position=990; Antisense; AACTTCCTGGGCAAGCAGGCCGAGA

Paste this into a BLAST search page for me
AGAGCGTGCGCAAGCTGTCCGGCTAAACGACCTCGCCAAGCTGATGAAGGTACCTGTTCGACGAGTATCTGCAGATACACTGTCTCCTCAAAATTGCTCTGCAGCATTATCAAAGCAGCCACAAGTACACCGCGAAATTCACCTTGATTTTTGATTTACCAGCACACCAGATTGTATAAGTTAGCAAGTTCGCCCCAGCATCGCCCCAGCAAATGTATCTTTAGTGTATGTACGTTACCGCTTGAACAAATCTTGAGGTCGACGAACTGCACTCCGGCTCTGGCTCTGGACACCGAGAAGTGGCCCACTACTTCGAGGAGAACTTAACTTCCTGGGCAAGCAGGCCGAGA

Full Affymetrix probeset data:

Annotations for 1636186_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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