FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636305_a_at:

>probe:Drosophila_2:1636305_a_at:557:197; Interrogation_Position=138; Antisense; AACGAACGAATTCAGCCGGCGAAGT
>probe:Drosophila_2:1636305_a_at:576:545; Interrogation_Position=193; Antisense; GGATCCCGTGGAACTAATGCTGAAG
>probe:Drosophila_2:1636305_a_at:382:213; Interrogation_Position=218; Antisense; AAGACCGGCTGCATAGAGCTTCACT
>probe:Drosophila_2:1636305_a_at:117:367; Interrogation_Position=265; Antisense; GAAGTTCCTCAGCAACGGTTTGGCC
>probe:Drosophila_2:1636305_a_at:477:165; Interrogation_Position=305; Antisense; AAACTGGCGCTGGTGGTCCGAACCG
>probe:Drosophila_2:1636305_a_at:70:537; Interrogation_Position=379; Antisense; GGTCATGTGCTACCAGAGCTCTGTG
>probe:Drosophila_2:1636305_a_at:287:527; Interrogation_Position=406; Antisense; GGGAACCAAGCTGCAGAACGCCATT
>probe:Drosophila_2:1636305_a_at:570:515; Interrogation_Position=442; Antisense; GTGTCGCCTGGGACAGCCGAAGATA
>probe:Drosophila_2:1636305_a_at:550:299; Interrogation_Position=473; Antisense; CGCGTGGACAACTTCGAGCAGCTAA
>probe:Drosophila_2:1636305_a_at:169:181; Interrogation_Position=519; Antisense; AAGAGTCGAACGTGGTGGCCGCCTT
>probe:Drosophila_2:1636305_a_at:348:575; Interrogation_Position=558; Antisense; GGCGCACTCAGCTGGAATCTGGGAC
>probe:Drosophila_2:1636305_a_at:578:91; Interrogation_Position=573; Antisense; AATCTGGGACAGCAACGGTCCTCGG
>probe:Drosophila_2:1636305_a_at:727:319; Interrogation_Position=608; Antisense; GCCCCTGCCGAAGATCTAGACAAAT
>probe:Drosophila_2:1636305_a_at:60:583; Interrogation_Position=636; Antisense; TGGCGCATTTGAAGCTTTTGTGAAC

Paste this into a BLAST search page for me
AACGAACGAATTCAGCCGGCGAAGTGGATCCCGTGGAACTAATGCTGAAGAAGACCGGCTGCATAGAGCTTCACTGAAGTTCCTCAGCAACGGTTTGGCCAAACTGGCGCTGGTGGTCCGAACCGGGTCATGTGCTACCAGAGCTCTGTGGGGAACCAAGCTGCAGAACGCCATTGTGTCGCCTGGGACAGCCGAAGATACGCGTGGACAACTTCGAGCAGCTAAAAGAGTCGAACGTGGTGGCCGCCTTGGCGCACTCAGCTGGAATCTGGGACAATCTGGGACAGCAACGGTCCTCGGGCCCCTGCCGAAGATCTAGACAAATTGGCGCATTTGAAGCTTTTGTGAAC

Full Affymetrix probeset data:

Annotations for 1636305_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720