FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636378_a_at:

>probe:Drosophila_2:1636378_a_at:222:371; Interrogation_Position=4887; Antisense; GAAGTCGTTTCAATTGGGTTGTATA
>probe:Drosophila_2:1636378_a_at:222:529; Interrogation_Position=4902; Antisense; GGGTTGTATACTTCTCTCTTTTATC
>probe:Drosophila_2:1636378_a_at:590:667; Interrogation_Position=4910; Antisense; TACTTCTCTCTTTTATCAACTACAA
>probe:Drosophila_2:1636378_a_at:607:421; Interrogation_Position=4997; Antisense; GAGAACTTGTTAGTTTACCAACTCT
>probe:Drosophila_2:1636378_a_at:678:471; Interrogation_Position=5009; Antisense; GTTTACCAACTCTCTTCGATTTTAG
>probe:Drosophila_2:1636378_a_at:383:181; Interrogation_Position=5130; Antisense; AAAACCCGGTTATTTCATGCTATAT
>probe:Drosophila_2:1636378_a_at:266:269; Interrogation_Position=5145; Antisense; CATGCTATATCATCCTACCATTTAT
>probe:Drosophila_2:1636378_a_at:496:491; Interrogation_Position=5208; Antisense; GTAAATCTTTGGCTACAAGTACTTT
>probe:Drosophila_2:1636378_a_at:416:569; Interrogation_Position=5218; Antisense; GGCTACAAGTACTTTTTCGTAATCG
>probe:Drosophila_2:1636378_a_at:319:717; Interrogation_Position=5233; Antisense; TTCGTAATCGTATACATCATCATTT
>probe:Drosophila_2:1636378_a_at:724:237; Interrogation_Position=5259; Antisense; AATCAAACTGGCACATATTCACGGA
>probe:Drosophila_2:1636378_a_at:123:241; Interrogation_Position=5340; Antisense; AATACGGGCATCACTCGAGGAATTC
>probe:Drosophila_2:1636378_a_at:326:23; Interrogation_Position=5374; Antisense; ATATCATGGCACTAGACCCACAACT
>probe:Drosophila_2:1636378_a_at:39:649; Interrogation_Position=5398; Antisense; TCACTCACCCCATAACAATATCGTG

Paste this into a BLAST search page for me
GAAGTCGTTTCAATTGGGTTGTATAGGGTTGTATACTTCTCTCTTTTATCTACTTCTCTCTTTTATCAACTACAAGAGAACTTGTTAGTTTACCAACTCTGTTTACCAACTCTCTTCGATTTTAGAAAACCCGGTTATTTCATGCTATATCATGCTATATCATCCTACCATTTATGTAAATCTTTGGCTACAAGTACTTTGGCTACAAGTACTTTTTCGTAATCGTTCGTAATCGTATACATCATCATTTAATCAAACTGGCACATATTCACGGAAATACGGGCATCACTCGAGGAATTCATATCATGGCACTAGACCCACAACTTCACTCACCCCATAACAATATCGTG

Full Affymetrix probeset data:

Annotations for 1636378_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720