FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636463_at:

>probe:Drosophila_2:1636463_at:668:143; Interrogation_Position=676; Antisense; ACTCGTGACCATAGGTGAGCCTTAA
>probe:Drosophila_2:1636463_at:72:639; Interrogation_Position=678; Antisense; TCGTGACCATAGGTGAGCCTTAAAA
>probe:Drosophila_2:1636463_at:343:509; Interrogation_Position=680; Antisense; GTGACCATAGGTGAGCCTTAAAATC
>probe:Drosophila_2:1636463_at:412:25; Interrogation_Position=686; Antisense; ATAGGTGAGCCTTAAAATCGGGATT
>probe:Drosophila_2:1636463_at:181:443; Interrogation_Position=689; Antisense; GGTGAGCCTTAAAATCGGGATTGGA
>probe:Drosophila_2:1636463_at:140:235; Interrogation_Position=701; Antisense; AATCGGGATTGGATCAGTCAGGTTC
>probe:Drosophila_2:1636463_at:430:291; Interrogation_Position=704; Antisense; CGGGATTGGATCAGTCAGGTTCAGA
>probe:Drosophila_2:1636463_at:276:465; Interrogation_Position=707; Antisense; GATTGGATCAGTCAGGTTCAGATAT
>probe:Drosophila_2:1636463_at:344:545; Interrogation_Position=711; Antisense; GGATCAGTCAGGTTCAGATATGTTC
>probe:Drosophila_2:1636463_at:543:265; Interrogation_Position=715; Antisense; CAGTCAGGTTCAGATATGTTCAATA
>probe:Drosophila_2:1636463_at:669:457; Interrogation_Position=727; Antisense; GATATGTTCAATATCACCCCTTCCT
>probe:Drosophila_2:1636463_at:449:23; Interrogation_Position=728; Antisense; ATATGTTCAATATCACCCCTTCCTT
>probe:Drosophila_2:1636463_at:683:601; Interrogation_Position=731; Antisense; TGTTCAATATCACCCCTTCCTTCTA
>probe:Drosophila_2:1636463_at:405:247; Interrogation_Position=735; Antisense; CAATATCACCCCTTCCTTCTAAAGG

Paste this into a BLAST search page for me
ACTCGTGACCATAGGTGAGCCTTAATCGTGACCATAGGTGAGCCTTAAAAGTGACCATAGGTGAGCCTTAAAATCATAGGTGAGCCTTAAAATCGGGATTGGTGAGCCTTAAAATCGGGATTGGAAATCGGGATTGGATCAGTCAGGTTCCGGGATTGGATCAGTCAGGTTCAGAGATTGGATCAGTCAGGTTCAGATATGGATCAGTCAGGTTCAGATATGTTCCAGTCAGGTTCAGATATGTTCAATAGATATGTTCAATATCACCCCTTCCTATATGTTCAATATCACCCCTTCCTTTGTTCAATATCACCCCTTCCTTCTACAATATCACCCCTTCCTTCTAAAGG

Full Affymetrix probeset data:

Annotations for 1636463_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720