FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636504_a_at:

>probe:Drosophila_2:1636504_a_at:469:421; Interrogation_Position=2430; Antisense; GAGAAGCGACCCCTACGAATGCGTC
>probe:Drosophila_2:1636504_a_at:42:623; Interrogation_Position=2449; Antisense; TGCGTCGTCCCAGAAACACTCAAAA
>probe:Drosophila_2:1636504_a_at:598:167; Interrogation_Position=2471; Antisense; AAATGTAGCCACCACTCTAGGGAAT
>probe:Drosophila_2:1636504_a_at:292:527; Interrogation_Position=2490; Antisense; GGGAATCCTGGTGAGCATGCTAATG
>probe:Drosophila_2:1636504_a_at:640:187; Interrogation_Position=2524; Antisense; AACAGCCCTGTGACATGGATATGCA
>probe:Drosophila_2:1636504_a_at:120:589; Interrogation_Position=2539; Antisense; TGGATATGCAATCCCTTGGACCCGA
>probe:Drosophila_2:1636504_a_at:393:411; Interrogation_Position=2557; Antisense; GACCCGACGATATGCAAACCCAGAT
>probe:Drosophila_2:1636504_a_at:619:175; Interrogation_Position=2572; Antisense; AAACCCAGATTCAGATGACCGCCGA
>probe:Drosophila_2:1636504_a_at:332:113; Interrogation_Position=2607; Antisense; AGCAGTTCGGTGAGCCTAATGCCCA
>probe:Drosophila_2:1636504_a_at:541:233; Interrogation_Position=2624; Antisense; AATGCCCACTGTGACTTATCAGCGT
>probe:Drosophila_2:1636504_a_at:252:131; Interrogation_Position=2690; Antisense; ACCGTCCCGAGATGAGCAACTGCGT
>probe:Drosophila_2:1636504_a_at:148:195; Interrogation_Position=2707; Antisense; AACTGCGTCGCGTTTTGCTGGATGC
>probe:Drosophila_2:1636504_a_at:550:723; Interrogation_Position=2721; Antisense; TTGCTGGATGCCTTTCACATGGTAT
>probe:Drosophila_2:1636504_a_at:467:711; Interrogation_Position=2734; Antisense; TTCACATGGTATCCCGTTCGCAGGT

Paste this into a BLAST search page for me
GAGAAGCGACCCCTACGAATGCGTCTGCGTCGTCCCAGAAACACTCAAAAAAATGTAGCCACCACTCTAGGGAATGGGAATCCTGGTGAGCATGCTAATGAACAGCCCTGTGACATGGATATGCATGGATATGCAATCCCTTGGACCCGAGACCCGACGATATGCAAACCCAGATAAACCCAGATTCAGATGACCGCCGAAGCAGTTCGGTGAGCCTAATGCCCAAATGCCCACTGTGACTTATCAGCGTACCGTCCCGAGATGAGCAACTGCGTAACTGCGTCGCGTTTTGCTGGATGCTTGCTGGATGCCTTTCACATGGTATTTCACATGGTATCCCGTTCGCAGGT

Full Affymetrix probeset data:

Annotations for 1636504_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720