FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636520_s_at:

>probe:Drosophila_2:1636520_s_at:669:133; Interrogation_Position=2928; Antisense; ACGTAGTTACTCTGGAGTCGGGCCA
>probe:Drosophila_2:1636520_s_at:426:69; Interrogation_Position=2943; Antisense; AGTCGGGCCACGTTATAAGCATTAA
>probe:Drosophila_2:1636520_s_at:629:183; Interrogation_Position=2979; Antisense; AAAAGGTCCTCGTAGACACACACGG
>probe:Drosophila_2:1636520_s_at:164:157; Interrogation_Position=2998; Antisense; ACACGGCGTACCCAATTACATTCTT
>probe:Drosophila_2:1636520_s_at:3:247; Interrogation_Position=3011; Antisense; AATTACATTCTTATTGCCGAGCGCA
>probe:Drosophila_2:1636520_s_at:413:417; Interrogation_Position=3029; Antisense; GAGCGCAACTTAAAGCAGTCACCTA
>probe:Drosophila_2:1636520_s_at:596:495; Interrogation_Position=3046; Antisense; GTCACCTAGGAAGTTGCAGCTGCTT
>probe:Drosophila_2:1636520_s_at:604:291; Interrogation_Position=3073; Antisense; CGTGGTCCCCATATGTCTGATCATT
>probe:Drosophila_2:1636520_s_at:279:421; Interrogation_Position=3163; Antisense; GAGCAGATGTAATTCTTCGCATAGG
>probe:Drosophila_2:1636520_s_at:321:159; Interrogation_Position=3196; Antisense; AAAGCAACTGCACCGTATTTTTTCA
>probe:Drosophila_2:1636520_s_at:529:463; Interrogation_Position=3276; Antisense; GATTCCTTCTGTTTCAGTGTCGTTA
>probe:Drosophila_2:1636520_s_at:145:519; Interrogation_Position=3364; Antisense; GTGGGTCCGAGCTTTATGCTTGACA
>probe:Drosophila_2:1636520_s_at:511:161; Interrogation_Position=3390; Antisense; AAATTGACTCTGTGATGCTTCCTTT
>probe:Drosophila_2:1636520_s_at:132:447; Interrogation_Position=3403; Antisense; GATGCTTCCTTTTTCGGTTTGCATA

Paste this into a BLAST search page for me
ACGTAGTTACTCTGGAGTCGGGCCAAGTCGGGCCACGTTATAAGCATTAAAAAAGGTCCTCGTAGACACACACGGACACGGCGTACCCAATTACATTCTTAATTACATTCTTATTGCCGAGCGCAGAGCGCAACTTAAAGCAGTCACCTAGTCACCTAGGAAGTTGCAGCTGCTTCGTGGTCCCCATATGTCTGATCATTGAGCAGATGTAATTCTTCGCATAGGAAAGCAACTGCACCGTATTTTTTCAGATTCCTTCTGTTTCAGTGTCGTTAGTGGGTCCGAGCTTTATGCTTGACAAAATTGACTCTGTGATGCTTCCTTTGATGCTTCCTTTTTCGGTTTGCATA

Full Affymetrix probeset data:

Annotations for 1636520_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720