FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636598_s_at:

>probe:Drosophila_2:1636598_s_at:545:213; Interrogation_Position=2403; Antisense; AAGAGCCGACTCCAACTAAGCTTAA
>probe:Drosophila_2:1636598_s_at:182:53; Interrogation_Position=2452; Antisense; ATGCATGTGGGCCAGTTGCAAGTCC
>probe:Drosophila_2:1636598_s_at:623:289; Interrogation_Position=2483; Antisense; CGGTGCAGCTTCAATTTTTTCGTCT
>probe:Drosophila_2:1636598_s_at:4:457; Interrogation_Position=2534; Antisense; GATACACGCTTGCATTATGTTCGCC
>probe:Drosophila_2:1636598_s_at:523:721; Interrogation_Position=2543; Antisense; TTGCATTATGTTCGCCCAGCTATCT
>probe:Drosophila_2:1636598_s_at:405:309; Interrogation_Position=2558; Antisense; CCAGCTATCTGCGATCGAACGGACA
>probe:Drosophila_2:1636598_s_at:419:383; Interrogation_Position=2574; Antisense; GAACGGACAGCCAATCACTAGGTTT
>probe:Drosophila_2:1636598_s_at:681:517; Interrogation_Position=2650; Antisense; GTGTGGCCTGCAGTCCCTGGAAAAT
>probe:Drosophila_2:1636598_s_at:141:47; Interrogation_Position=2673; Antisense; ATCCGCCGTTTCGAAATGTGTTCCG
>probe:Drosophila_2:1636598_s_at:530:67; Interrogation_Position=2726; Antisense; ATGGCATCAGAATCAGACTCAGAAT
>probe:Drosophila_2:1636598_s_at:677:351; Interrogation_Position=2770; Antisense; GCAGCAATTGTTTTCGCATCGCTTT
>probe:Drosophila_2:1636598_s_at:584:345; Interrogation_Position=2785; Antisense; GCATCGCTTTAAGTTTACGACGCCT
>probe:Drosophila_2:1636598_s_at:369:477; Interrogation_Position=2797; Antisense; GTTTACGACGCCTAATTTACTCATT
>probe:Drosophila_2:1636598_s_at:347:439; Interrogation_Position=2836; Antisense; GAGGCCATAAAACGCGTTCTATTTT

Paste this into a BLAST search page for me
AAGAGCCGACTCCAACTAAGCTTAAATGCATGTGGGCCAGTTGCAAGTCCCGGTGCAGCTTCAATTTTTTCGTCTGATACACGCTTGCATTATGTTCGCCTTGCATTATGTTCGCCCAGCTATCTCCAGCTATCTGCGATCGAACGGACAGAACGGACAGCCAATCACTAGGTTTGTGTGGCCTGCAGTCCCTGGAAAATATCCGCCGTTTCGAAATGTGTTCCGATGGCATCAGAATCAGACTCAGAATGCAGCAATTGTTTTCGCATCGCTTTGCATCGCTTTAAGTTTACGACGCCTGTTTACGACGCCTAATTTACTCATTGAGGCCATAAAACGCGTTCTATTTT

Full Affymetrix probeset data:

Annotations for 1636598_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720