FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636612_a_at:

>probe:Drosophila_2:1636612_a_at:452:559; Interrogation_Position=3671; Antisense; GGACAAGAACTGCATCATCTCGTGA
>probe:Drosophila_2:1636612_a_at:264:529; Interrogation_Position=3711; Antisense; GGGTTCCAATCAGAGCCGAGGTTCG
>probe:Drosophila_2:1636612_a_at:727:303; Interrogation_Position=3726; Antisense; CCGAGGTTCGAGCACAGGTCCAGAT
>probe:Drosophila_2:1636612_a_at:353:657; Interrogation_Position=3780; Antisense; TAATGTGGAGCCACGGGCAACTCCA
>probe:Drosophila_2:1636612_a_at:683:193; Interrogation_Position=3798; Antisense; AACTCCATCTCGTGGCTAACGAAGT
>probe:Drosophila_2:1636612_a_at:169:197; Interrogation_Position=3815; Antisense; AACGAAGTGGCCCAGAACGCTCGCG
>probe:Drosophila_2:1636612_a_at:326:473; Interrogation_Position=3895; Antisense; GTTCAACTTGACATTAAGGCGCCTA
>probe:Drosophila_2:1636612_a_at:715:69; Interrogation_Position=3911; Antisense; AGGCGCCTAGTTAAGGTACACTCAC
>probe:Drosophila_2:1636612_a_at:666:151; Interrogation_Position=3938; Antisense; ACATACATATGCAACTCCGGAGGAG
>probe:Drosophila_2:1636612_a_at:669:551; Interrogation_Position=3962; Antisense; GGAGACCCTACAATAAGAGCCAACA
>probe:Drosophila_2:1636612_a_at:557:143; Interrogation_Position=3986; Antisense; ACTGTTCCAAATACACATCCCTAGT
>probe:Drosophila_2:1636612_a_at:407:445; Interrogation_Position=4065; Antisense; GATACATTGCAGATAACCCTATTTA
>probe:Drosophila_2:1636612_a_at:22:343; Interrogation_Position=4111; Antisense; GCATTCTAGGCTTACCAATTACACT
>probe:Drosophila_2:1636612_a_at:131:395; Interrogation_Position=4161; Antisense; GAAATGCTGACGATTGGGCTAATGA

Paste this into a BLAST search page for me
GGACAAGAACTGCATCATCTCGTGAGGGTTCCAATCAGAGCCGAGGTTCGCCGAGGTTCGAGCACAGGTCCAGATTAATGTGGAGCCACGGGCAACTCCAAACTCCATCTCGTGGCTAACGAAGTAACGAAGTGGCCCAGAACGCTCGCGGTTCAACTTGACATTAAGGCGCCTAAGGCGCCTAGTTAAGGTACACTCACACATACATATGCAACTCCGGAGGAGGGAGACCCTACAATAAGAGCCAACAACTGTTCCAAATACACATCCCTAGTGATACATTGCAGATAACCCTATTTAGCATTCTAGGCTTACCAATTACACTGAAATGCTGACGATTGGGCTAATGA

Full Affymetrix probeset data:

Annotations for 1636612_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720