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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636614_a_at:

>probe:Drosophila_2:1636614_a_at:178:165; Interrogation_Position=2829; Antisense; AAATCGGCGATACGGTGGGCTACTT
>probe:Drosophila_2:1636614_a_at:532:521; Interrogation_Position=2845; Antisense; GGGCTACTTTCCCAAGGAGTATGTG
>probe:Drosophila_2:1636614_a_at:562:161; Interrogation_Position=2879; Antisense; AAATTGGCCAGCGAAGAGCTTTGAT
>probe:Drosophila_2:1636614_a_at:421:669; Interrogation_Position=2912; Antisense; TACGAGGTTTACTTTGCACCCAAGG
>probe:Drosophila_2:1636614_a_at:287:121; Interrogation_Position=2950; Antisense; AGCGGCAGCCATTGCTGAATTGCCA
>probe:Drosophila_2:1636614_a_at:345:119; Interrogation_Position=3040; Antisense; AGCTGTAGCTGCAGGCGGAGCCATT
>probe:Drosophila_2:1636614_a_at:294:555; Interrogation_Position=3056; Antisense; GGAGCCATTCGAGGAGCCGCCATCG
>probe:Drosophila_2:1636614_a_at:272:295; Interrogation_Position=3094; Antisense; CGATGTCGCCAGTCACAGCAACAAC
>probe:Drosophila_2:1636614_a_at:398:5; Interrogation_Position=3120; Antisense; ATTGCAGCTAGATCGTAGCCTAGTT
>probe:Drosophila_2:1636614_a_at:580:657; Interrogation_Position=3185; Antisense; TAAGCCTATTTTGTTTGCCTTCCTT
>probe:Drosophila_2:1636614_a_at:721:699; Interrogation_Position=3237; Antisense; TTTTTTGCGTCGTCTGCTCGAAACA
>probe:Drosophila_2:1636614_a_at:449:637; Interrogation_Position=3246; Antisense; TCGTCTGCTCGAAACATTTGTGCCA
>probe:Drosophila_2:1636614_a_at:495:149; Interrogation_Position=3259; Antisense; ACATTTGTGCCAATCACCGGAAAAT
>probe:Drosophila_2:1636614_a_at:468:433; Interrogation_Position=3372; Antisense; GAGTGTACATGCTTACATTTCTAAG

Paste this into a BLAST search page for me
AAATCGGCGATACGGTGGGCTACTTGGGCTACTTTCCCAAGGAGTATGTGAAATTGGCCAGCGAAGAGCTTTGATTACGAGGTTTACTTTGCACCCAAGGAGCGGCAGCCATTGCTGAATTGCCAAGCTGTAGCTGCAGGCGGAGCCATTGGAGCCATTCGAGGAGCCGCCATCGCGATGTCGCCAGTCACAGCAACAACATTGCAGCTAGATCGTAGCCTAGTTTAAGCCTATTTTGTTTGCCTTCCTTTTTTTTGCGTCGTCTGCTCGAAACATCGTCTGCTCGAAACATTTGTGCCAACATTTGTGCCAATCACCGGAAAATGAGTGTACATGCTTACATTTCTAAG

Full Affymetrix probeset data:

Annotations for 1636614_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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