FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636741_s_at:

>probe:Drosophila_2:1636741_s_at:522:263; Interrogation_Position=2621; Antisense; CAGCGGCCAATTCTGGCGACAAAAT
>probe:Drosophila_2:1636741_s_at:256:185; Interrogation_Position=2656; Antisense; AACAATGGCCAGAGCGCGGCCGGAA
>probe:Drosophila_2:1636741_s_at:606:539; Interrogation_Position=2677; Antisense; GGAAACGATCCCTCCATGGAAGTGG
>probe:Drosophila_2:1636741_s_at:492:123; Interrogation_Position=2706; Antisense; AGCCCATTAGGCTCATTCCGATATC
>probe:Drosophila_2:1636741_s_at:674:643; Interrogation_Position=2718; Antisense; TCATTCCGATATCCGGTTGTTCCCG
>probe:Drosophila_2:1636741_s_at:579:465; Interrogation_Position=2733; Antisense; GTTGTTCCCGGCTATCAGCGGTATT
>probe:Drosophila_2:1636741_s_at:77:121; Interrogation_Position=2749; Antisense; AGCGGTATTGGCTAACGATTAATGA
>probe:Drosophila_2:1636741_s_at:138:483; Interrogation_Position=2826; Antisense; GTATATGCACTTGCTTCAGGACTAG
>probe:Drosophila_2:1636741_s_at:332:645; Interrogation_Position=2841; Antisense; TCAGGACTAGCAGAGAATACAACAA
>probe:Drosophila_2:1636741_s_at:699:53; Interrogation_Position=2885; Antisense; ATGCAAACAACCAACCTACAAGTGT
>probe:Drosophila_2:1636741_s_at:374:727; Interrogation_Position=2919; Antisense; TTGATAAAATGCTTCTGCGGCCGCG
>probe:Drosophila_2:1636741_s_at:269:623; Interrogation_Position=2934; Antisense; TGCGGCCGCGGCTGTATACAAAAAT
>probe:Drosophila_2:1636741_s_at:218:547; Interrogation_Position=3008; Antisense; GGATGAATCCTTTACTTCTGCTGCT
>probe:Drosophila_2:1636741_s_at:9:643; Interrogation_Position=3024; Antisense; TCTGCTGCTGCCGTGTTGATGATAC

Paste this into a BLAST search page for me
CAGCGGCCAATTCTGGCGACAAAATAACAATGGCCAGAGCGCGGCCGGAAGGAAACGATCCCTCCATGGAAGTGGAGCCCATTAGGCTCATTCCGATATCTCATTCCGATATCCGGTTGTTCCCGGTTGTTCCCGGCTATCAGCGGTATTAGCGGTATTGGCTAACGATTAATGAGTATATGCACTTGCTTCAGGACTAGTCAGGACTAGCAGAGAATACAACAAATGCAAACAACCAACCTACAAGTGTTTGATAAAATGCTTCTGCGGCCGCGTGCGGCCGCGGCTGTATACAAAAATGGATGAATCCTTTACTTCTGCTGCTTCTGCTGCTGCCGTGTTGATGATAC

Full Affymetrix probeset data:

Annotations for 1636741_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720