FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636760_a_at:

>probe:Drosophila_2:1636760_a_at:478:129; Interrogation_Position=1179; Antisense; AACGGCCAACTTTGAGGATTCCCTG
>probe:Drosophila_2:1636760_a_at:730:65; Interrogation_Position=1225; Antisense; ATGGCTCAGGAGCTGCATTTGCACG
>probe:Drosophila_2:1636760_a_at:196:439; Interrogation_Position=1249; Antisense; GAGGCAGTTGAGGATTCTACCCTAA
>probe:Drosophila_2:1636760_a_at:312:97; Interrogation_Position=1286; Antisense; AGATCTCCGATCTTATGTCCAACTT
>probe:Drosophila_2:1636760_a_at:220:81; Interrogation_Position=1325; Antisense; AGGTGATCTTCCTGCAACTGCGCGA
>probe:Drosophila_2:1636760_a_at:713:451; Interrogation_Position=1348; Antisense; GATCTTTGTAGCTACTTTGCCGACA
>probe:Drosophila_2:1636760_a_at:496:729; Interrogation_Position=1385; Antisense; TTGTGAACCAGTTTCTGTCCACCAA
>probe:Drosophila_2:1636760_a_at:482:607; Interrogation_Position=1499; Antisense; TGAGGACTACTCACACATCGCGAGT
>probe:Drosophila_2:1636760_a_at:441:511; Interrogation_Position=1532; Antisense; GTGAAGATCGCCTAGCTCAACGCAG
>probe:Drosophila_2:1636760_a_at:303:159; Interrogation_Position=1595; Antisense; ACAAAGAGGTTGATCGCCATCGCGC
>probe:Drosophila_2:1636760_a_at:245:315; Interrogation_Position=1610; Antisense; GCCATCGCGCCAAGATTCTAGAGAT
>probe:Drosophila_2:1636760_a_at:567:99; Interrogation_Position=1659; Antisense; AGAGGCTTTGGCCAATCTGCCAGGT
>probe:Drosophila_2:1636760_a_at:20:535; Interrogation_Position=1681; Antisense; GGTGAATTGCACCAGGAAGCCCCAT
>probe:Drosophila_2:1636760_a_at:181:379; Interrogation_Position=1696; Antisense; GAAGCCCCATCGGATTAACATTTTA

Paste this into a BLAST search page for me
AACGGCCAACTTTGAGGATTCCCTGATGGCTCAGGAGCTGCATTTGCACGGAGGCAGTTGAGGATTCTACCCTAAAGATCTCCGATCTTATGTCCAACTTAGGTGATCTTCCTGCAACTGCGCGAGATCTTTGTAGCTACTTTGCCGACATTGTGAACCAGTTTCTGTCCACCAATGAGGACTACTCACACATCGCGAGTGTGAAGATCGCCTAGCTCAACGCAGACAAAGAGGTTGATCGCCATCGCGCGCCATCGCGCCAAGATTCTAGAGATAGAGGCTTTGGCCAATCTGCCAGGTGGTGAATTGCACCAGGAAGCCCCATGAAGCCCCATCGGATTAACATTTTA

Full Affymetrix probeset data:

Annotations for 1636760_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720