FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636762_a_at:

>probe:Drosophila_2:1636762_a_at:12:579; Interrogation_Position=1089; Antisense; GGCCCGCCACGATGAGTTCTAGAGT
>probe:Drosophila_2:1636762_a_at:666:431; Interrogation_Position=1110; Antisense; GAGTGTCTAGATACCCAGAATCCCT
>probe:Drosophila_2:1636762_a_at:352:465; Interrogation_Position=1143; Antisense; GATTGATCCTATGAATCTCCCACTT
>probe:Drosophila_2:1636762_a_at:281:149; Interrogation_Position=1181; Antisense; ACTTGTAATCTTGTCTAGCCCTTAA
>probe:Drosophila_2:1636762_a_at:195:175; Interrogation_Position=1227; Antisense; AAACCGACTCGAATGATGGGCCTTC
>probe:Drosophila_2:1636762_a_at:165:65; Interrogation_Position=1242; Antisense; ATGGGCCTTCCTTTTGTATGTGGCA
>probe:Drosophila_2:1636762_a_at:428:63; Interrogation_Position=1259; Antisense; ATGTGGCACCACGACCAATTGATTT
>probe:Drosophila_2:1636762_a_at:542:245; Interrogation_Position=1298; Antisense; AATTGAAAGGCGTCCACGTCAGCTC
>probe:Drosophila_2:1636762_a_at:608:111; Interrogation_Position=1327; Antisense; AGCATCAATGGCCACGTCACTGGAA
>probe:Drosophila_2:1636762_a_at:149:321; Interrogation_Position=1418; Antisense; GCCGCCTTTGCCTGTGTAACATATG
>probe:Drosophila_2:1636762_a_at:507:57; Interrogation_Position=1454; Antisense; ATGATTTTCGCTGTAGCCCGATTTA
>probe:Drosophila_2:1636762_a_at:316:321; Interrogation_Position=1469; Antisense; GCCCGATTTATTTCCAGCTGCGAGA
>probe:Drosophila_2:1636762_a_at:63:37; Interrogation_Position=1537; Antisense; ATCTTGAATGCCTACGATTGCCACT
>probe:Drosophila_2:1636762_a_at:35:465; Interrogation_Position=1552; Antisense; GATTGCCACTTATCTGGACTTGATA

Paste this into a BLAST search page for me
GGCCCGCCACGATGAGTTCTAGAGTGAGTGTCTAGATACCCAGAATCCCTGATTGATCCTATGAATCTCCCACTTACTTGTAATCTTGTCTAGCCCTTAAAAACCGACTCGAATGATGGGCCTTCATGGGCCTTCCTTTTGTATGTGGCAATGTGGCACCACGACCAATTGATTTAATTGAAAGGCGTCCACGTCAGCTCAGCATCAATGGCCACGTCACTGGAAGCCGCCTTTGCCTGTGTAACATATGATGATTTTCGCTGTAGCCCGATTTAGCCCGATTTATTTCCAGCTGCGAGAATCTTGAATGCCTACGATTGCCACTGATTGCCACTTATCTGGACTTGATA

Full Affymetrix probeset data:

Annotations for 1636762_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720