FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636775_at:

>probe:Drosophila_2:1636775_at:507:249; Interrogation_Position=1031; Antisense; GAATAAACGAAATACTTGCCCTTAG
>probe:Drosophila_2:1636775_at:190:47; Interrogation_Position=476; Antisense; ATCCGAAATGGAGCCTGGAGCGCCG
>probe:Drosophila_2:1636775_at:537:595; Interrogation_Position=521; Antisense; TGTGGCGCAAGGACTCTCCGGAGTC
>probe:Drosophila_2:1636775_at:98:635; Interrogation_Position=544; Antisense; TCGAAAGTCCGTTTTCGCTTCGACG
>probe:Drosophila_2:1636775_at:179:343; Interrogation_Position=560; Antisense; GCTTCGACGTCGAGGTCCTGGAGTT
>probe:Drosophila_2:1636775_at:365:631; Interrogation_Position=575; Antisense; TCCTGGAGTTCGAGAGGCATCCTCA
>probe:Drosophila_2:1636775_at:725:435; Interrogation_Position=619; Antisense; GAGGATCACTTCTCGATGACCAATC
>probe:Drosophila_2:1636775_at:569:237; Interrogation_Position=640; Antisense; AATCTCTCGGCGACAGTGGCCATGT
>probe:Drosophila_2:1636775_at:385:153; Interrogation_Position=652; Antisense; ACAGTGGCCATGTGCGCAACTTGTG
>probe:Drosophila_2:1636775_at:575:603; Interrogation_Position=698; Antisense; TGTTCCTGCCCTGGTATTTGATGGA
>probe:Drosophila_2:1636775_at:138:85; Interrogation_Position=766; Antisense; AGAGCCCGGCTTCTTGTATATAGGT
>probe:Drosophila_2:1636775_at:13:33; Interrogation_Position=856; Antisense; ACGTACGTTGTATATAGGACCTGTG
>probe:Drosophila_2:1636775_at:18:241; Interrogation_Position=918; Antisense; AATACGAGTGCGACAGTGACTGCTA
>probe:Drosophila_2:1636775_at:546:73; Interrogation_Position=974; Antisense; AGGACGTGTACATTCTCATAATTTT

Paste this into a BLAST search page for me
GAATAAACGAAATACTTGCCCTTAGATCCGAAATGGAGCCTGGAGCGCCGTGTGGCGCAAGGACTCTCCGGAGTCTCGAAAGTCCGTTTTCGCTTCGACGGCTTCGACGTCGAGGTCCTGGAGTTTCCTGGAGTTCGAGAGGCATCCTCAGAGGATCACTTCTCGATGACCAATCAATCTCTCGGCGACAGTGGCCATGTACAGTGGCCATGTGCGCAACTTGTGTGTTCCTGCCCTGGTATTTGATGGAAGAGCCCGGCTTCTTGTATATAGGTACGTACGTTGTATATAGGACCTGTGAATACGAGTGCGACAGTGACTGCTAAGGACGTGTACATTCTCATAATTTT

Full Affymetrix probeset data:

Annotations for 1636775_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720