Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636822_s_at:

>probe:Drosophila_2:1636822_s_at:236:275; Interrogation_Position=1045; Antisense; CTTACCCTCGTCGTACATAGTTGTA
>probe:Drosophila_2:1636822_s_at:625:161; Interrogation_Position=1087; Antisense; AAATTTAAGTTGGAGCAGCCAGCCA
>probe:Drosophila_2:1636822_s_at:549:157; Interrogation_Position=1121; Antisense; ACACGTTCTCGTACATTACTGGGAT
>probe:Drosophila_2:1636822_s_at:291:345; Interrogation_Position=1209; Antisense; GCATTCATTCTATAAGCAGTTGACG
>probe:Drosophila_2:1636822_s_at:489:407; Interrogation_Position=1230; Antisense; GACGGAATTTCACCAACTAATTGAT
>probe:Drosophila_2:1636822_s_at:170:241; Interrogation_Position=1255; Antisense; AATAACATAGGTACTGCTGCTTGCA
>probe:Drosophila_2:1636822_s_at:358:657; Interrogation_Position=811; Antisense; TAAGATGGCTGCTGCCGGATTGTGC
>probe:Drosophila_2:1636822_s_at:403:289; Interrogation_Position=835; Antisense; CGGGCATTTCGCGACAGTTTAAACT
>probe:Drosophila_2:1636822_s_at:99:397; Interrogation_Position=860; Antisense; GAAATTCTAGCACCATGTTCCGTGT
>probe:Drosophila_2:1636822_s_at:174:473; Interrogation_Position=892; Antisense; GTTAAATTCAATCGCCATCCGCACT
>probe:Drosophila_2:1636822_s_at:297:633; Interrogation_Position=909; Antisense; TCCGCACTGGCCAATCAATCTCAAG
>probe:Drosophila_2:1636822_s_at:203:215; Interrogation_Position=931; Antisense; AAGATCAACTCATCAGTCCATCTCT
>probe:Drosophila_2:1636822_s_at:244:69; Interrogation_Position=974; Antisense; ATGGCGAGCCGAGCAGCGCGAAATT
>probe:Drosophila_2:1636822_s_at:525:261; Interrogation_Position=987; Antisense; CAGCGCGAAATTTATTGCAACAGTT

Paste this into a BLAST search page for me
CTTACCCTCGTCGTACATAGTTGTAAAATTTAAGTTGGAGCAGCCAGCCAACACGTTCTCGTACATTACTGGGATGCATTCATTCTATAAGCAGTTGACGGACGGAATTTCACCAACTAATTGATAATAACATAGGTACTGCTGCTTGCATAAGATGGCTGCTGCCGGATTGTGCCGGGCATTTCGCGACAGTTTAAACTGAAATTCTAGCACCATGTTCCGTGTGTTAAATTCAATCGCCATCCGCACTTCCGCACTGGCCAATCAATCTCAAGAAGATCAACTCATCAGTCCATCTCTATGGCGAGCCGAGCAGCGCGAAATTCAGCGCGAAATTTATTGCAACAGTT

Full Affymetrix probeset data:

Annotations for 1636822_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime