Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636847_s_at:

>probe:Drosophila_2:1636847_s_at:147:491; Interrogation_Position=1768; Antisense; GTAAATTATGGCTTTCAGACTGAAT
>probe:Drosophila_2:1636847_s_at:238:233; Interrogation_Position=1805; Antisense; AATGCATACATTCTTTAATCGGTTT
>probe:Drosophila_2:1636847_s_at:349:653; Interrogation_Position=1820; Antisense; TAATCGGTTTTCTACTCATTTTTTG
>probe:Drosophila_2:1636847_s_at:296:221; Interrogation_Position=1864; Antisense; AAGTGAAACGCACACACCAATCCAC
>probe:Drosophila_2:1636847_s_at:23:259; Interrogation_Position=1876; Antisense; CACACCAATCCACATGAGCACATAA
>probe:Drosophila_2:1636847_s_at:186:421; Interrogation_Position=1891; Antisense; GAGCACATAAATCTGGATACTTGAA
>probe:Drosophila_2:1636847_s_at:378:365; Interrogation_Position=1933; Antisense; GAATCTATGTATCAAACCGAGCAGA
>probe:Drosophila_2:1636847_s_at:207:419; Interrogation_Position=1951; Antisense; GAGCAGAAACTATTCCCTTTCGCCG
>probe:Drosophila_2:1636847_s_at:504:91; Interrogation_Position=2017; Antisense; AGTATTACTGTTGCATACCTATAAT
>probe:Drosophila_2:1636847_s_at:149:721; Interrogation_Position=2057; Antisense; TTGTTGGCCACAAGCGTAATACCCA
>probe:Drosophila_2:1636847_s_at:179:493; Interrogation_Position=2072; Antisense; GTAATACCCAATCCACTGCAAATAT
>probe:Drosophila_2:1636847_s_at:595:685; Interrogation_Position=2136; Antisense; TATACTTTCGAAATGTACCTCTTTA
>probe:Drosophila_2:1636847_s_at:661:163; Interrogation_Position=2184; Antisense; AAATGTAATGTGTTGTCCATGGGAA
>probe:Drosophila_2:1636847_s_at:721:561; Interrogation_Position=2232; Antisense; GGAACTAGCATATGAACCCAAAATG

Paste this into a BLAST search page for me
GTAAATTATGGCTTTCAGACTGAATAATGCATACATTCTTTAATCGGTTTTAATCGGTTTTCTACTCATTTTTTGAAGTGAAACGCACACACCAATCCACCACACCAATCCACATGAGCACATAAGAGCACATAAATCTGGATACTTGAAGAATCTATGTATCAAACCGAGCAGAGAGCAGAAACTATTCCCTTTCGCCGAGTATTACTGTTGCATACCTATAATTTGTTGGCCACAAGCGTAATACCCAGTAATACCCAATCCACTGCAAATATTATACTTTCGAAATGTACCTCTTTAAAATGTAATGTGTTGTCCATGGGAAGGAACTAGCATATGAACCCAAAATG

Full Affymetrix probeset data:

Annotations for 1636847_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime