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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636883_s_at:

>probe:Drosophila_2:1636883_s_at:470:293; Interrogation_Position=1011; Antisense; CGATTGATCGAAGATCGGGTGGCAA
>probe:Drosophila_2:1636883_s_at:474:527; Interrogation_Position=1038; Antisense; GGGAAAGAAACAATCCACTTCACAG
>probe:Drosophila_2:1636883_s_at:458:389; Interrogation_Position=1074; Antisense; GAAAAACAATACACACACCGCAAAT
>probe:Drosophila_2:1636883_s_at:544:163; Interrogation_Position=1109; Antisense; AAATTTCGCTCAGGTCTTTTCGTCA
>probe:Drosophila_2:1636883_s_at:16:267; Interrogation_Position=1119; Antisense; CAGGTCTTTTCGTCATTTTGCATTA
>probe:Drosophila_2:1636883_s_at:423:59; Interrogation_Position=1150; Antisense; ATGTTTAACGTCTTGTTAGCTAAAG
>probe:Drosophila_2:1636883_s_at:411:491; Interrogation_Position=1221; Antisense; GTAATTGCATTTAATCGGTAGTTTT
>probe:Drosophila_2:1636883_s_at:269:477; Interrogation_Position=719; Antisense; GTATTTATACACACGAGTTTTTAAG
>probe:Drosophila_2:1636883_s_at:430:267; Interrogation_Position=824; Antisense; CAGGATGTGCGTTGAGGTGTTTTTT
>probe:Drosophila_2:1636883_s_at:202:449; Interrogation_Position=854; Antisense; GATCCTGCGGCGTTTCGCCTGGAAA
>probe:Drosophila_2:1636883_s_at:666:585; Interrogation_Position=873; Antisense; TGGAAAGGCGAGTCGTTCGGAAAAT
>probe:Drosophila_2:1636883_s_at:376:423; Interrogation_Position=902; Antisense; GAGAAAAGTAGTCCCCTTGCATATT
>probe:Drosophila_2:1636883_s_at:679:503; Interrogation_Position=912; Antisense; GTCCCCTTGCATATTATTTGTGTAA
>probe:Drosophila_2:1636883_s_at:325:249; Interrogation_Position=975; Antisense; CAATTGCATCTTGTTCTCTAAGTAG

Paste this into a BLAST search page for me
CGATTGATCGAAGATCGGGTGGCAAGGGAAAGAAACAATCCACTTCACAGGAAAAACAATACACACACCGCAAATAAATTTCGCTCAGGTCTTTTCGTCACAGGTCTTTTCGTCATTTTGCATTAATGTTTAACGTCTTGTTAGCTAAAGGTAATTGCATTTAATCGGTAGTTTTGTATTTATACACACGAGTTTTTAAGCAGGATGTGCGTTGAGGTGTTTTTTGATCCTGCGGCGTTTCGCCTGGAAATGGAAAGGCGAGTCGTTCGGAAAATGAGAAAAGTAGTCCCCTTGCATATTGTCCCCTTGCATATTATTTGTGTAACAATTGCATCTTGTTCTCTAAGTAG

Full Affymetrix probeset data:

Annotations for 1636883_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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