FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636923_a_at:

>probe:Drosophila_2:1636923_a_at:199:229; Interrogation_Position=7422; Antisense; AATGCCGAATCTATTGTTTCCCGCA
>probe:Drosophila_2:1636923_a_at:552:717; Interrogation_Position=7439; Antisense; TTCCCGCAACGTGAACTCCGTGAGA
>probe:Drosophila_2:1636923_a_at:38:409; Interrogation_Position=7462; Antisense; GACGGGATGCCATTATTTCTACCAT
>probe:Drosophila_2:1636923_a_at:602:387; Interrogation_Position=7490; Antisense; GAAAATGCTCGAGGACTGTCCCGAC
>probe:Drosophila_2:1636923_a_at:358:555; Interrogation_Position=7523; Antisense; GGACGCTGTTGTGGGTCTTTGCCAA
>probe:Drosophila_2:1636923_a_at:681:691; Interrogation_Position=7540; Antisense; TTTGCCAAGGTCTGACGCCAGTGAA
>probe:Drosophila_2:1636923_a_at:434:237; Interrogation_Position=7563; Antisense; AATCGAGGCGTGGTCGTACGCACAT
>probe:Drosophila_2:1636923_a_at:186:489; Interrogation_Position=7578; Antisense; GTACGCACATTAGCCCAGATGCAGC
>probe:Drosophila_2:1636923_a_at:612:607; Interrogation_Position=7607; Antisense; TGAGGAGACCTCTAACAGCAACCAG
>probe:Drosophila_2:1636923_a_at:10:529; Interrogation_Position=7631; Antisense; GGGATGATTCTACGCTATGTTCTAA
>probe:Drosophila_2:1636923_a_at:185:611; Interrogation_Position=7651; Antisense; TCTAAGTTCTTTTTAGGCCCTCTAT
>probe:Drosophila_2:1636923_a_at:516:633; Interrogation_Position=7715; Antisense; TCCCGCTTTGCGCTTGTAAGATATC
>probe:Drosophila_2:1636923_a_at:401:243; Interrogation_Position=7834; Antisense; AATTTGTTGCCTAAGTGGCCCGATA
>probe:Drosophila_2:1636923_a_at:486:85; Interrogation_Position=7937; Antisense; AGTCCTTTGTACACAGAGCCTTTTG

Paste this into a BLAST search page for me
AATGCCGAATCTATTGTTTCCCGCATTCCCGCAACGTGAACTCCGTGAGAGACGGGATGCCATTATTTCTACCATGAAAATGCTCGAGGACTGTCCCGACGGACGCTGTTGTGGGTCTTTGCCAATTTGCCAAGGTCTGACGCCAGTGAAAATCGAGGCGTGGTCGTACGCACATGTACGCACATTAGCCCAGATGCAGCTGAGGAGACCTCTAACAGCAACCAGGGGATGATTCTACGCTATGTTCTAATCTAAGTTCTTTTTAGGCCCTCTATTCCCGCTTTGCGCTTGTAAGATATCAATTTGTTGCCTAAGTGGCCCGATAAGTCCTTTGTACACAGAGCCTTTTG

Full Affymetrix probeset data:

Annotations for 1636923_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720