FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636948_a_at:

>probe:Drosophila_2:1636948_a_at:269:11; Interrogation_Position=1863; Antisense; ATTCGGCATTGGTCGCATCATGTAC
>probe:Drosophila_2:1636948_a_at:548:35; Interrogation_Position=1879; Antisense; ATCATGTACTCCCTGTTGGAGCACA
>probe:Drosophila_2:1636948_a_at:36:589; Interrogation_Position=1895; Antisense; TGGAGCACAGTTTCCAATGCCGCGA
>probe:Drosophila_2:1636948_a_at:77:421; Interrogation_Position=1927; Antisense; GAGCAGCGGTGCTACTTTACGCTAC
>probe:Drosophila_2:1636948_a_at:511:131; Interrogation_Position=2002; Antisense; ACCGACTTTCAACCTTATACTCAGA
>probe:Drosophila_2:1636948_a_at:453:693; Interrogation_Position=2057; Antisense; TTTCGCACAAGGTGGACGACTCCAG
>probe:Drosophila_2:1636948_a_at:139:405; Interrogation_Position=2074; Antisense; GACTCCAGTGGATCCATTGGCAGGC
>probe:Drosophila_2:1636948_a_at:245:49; Interrogation_Position=2102; Antisense; ATGCCCGCACGGATGAGATTGCCAT
>probe:Drosophila_2:1636948_a_at:506:679; Interrogation_Position=2131; Antisense; TATGGCATCACCGTGGACTTCGACA
>probe:Drosophila_2:1636948_a_at:559:27; Interrogation_Position=2171; Antisense; ATACGGTGACTCTGCGAGATCGGAA
>probe:Drosophila_2:1636948_a_at:718:277; Interrogation_Position=2198; Antisense; CTATGAAACAGGTGCGCGTCGGTCT
>probe:Drosophila_2:1636948_a_at:290:637; Interrogation_Position=2254; Antisense; TCGACGGCGAGAACCACCTGGGAGA
>probe:Drosophila_2:1636948_a_at:533:433; Interrogation_Position=2277; Antisense; GAGTGTCACCGAACAGTATCCTCTG
>probe:Drosophila_2:1636948_a_at:1:345; Interrogation_Position=2353; Antisense; GCTTGGCACGCATTTACAGAGTTTC

Paste this into a BLAST search page for me
ATTCGGCATTGGTCGCATCATGTACATCATGTACTCCCTGTTGGAGCACATGGAGCACAGTTTCCAATGCCGCGAGAGCAGCGGTGCTACTTTACGCTACACCGACTTTCAACCTTATACTCAGATTTCGCACAAGGTGGACGACTCCAGGACTCCAGTGGATCCATTGGCAGGCATGCCCGCACGGATGAGATTGCCATTATGGCATCACCGTGGACTTCGACAATACGGTGACTCTGCGAGATCGGAACTATGAAACAGGTGCGCGTCGGTCTTCGACGGCGAGAACCACCTGGGAGAGAGTGTCACCGAACAGTATCCTCTGGCTTGGCACGCATTTACAGAGTTTC

Full Affymetrix probeset data:

Annotations for 1636948_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720