FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1636958_s_at:

>probe:Drosophila_2:1636958_s_at:3:181; Interrogation_Position=1334; Antisense; AAAATATGCGGCGTCTCAATTCTCC
>probe:Drosophila_2:1636958_s_at:55:411; Interrogation_Position=1432; Antisense; GACCAATCTTAAGACCGGCGAGCCG
>probe:Drosophila_2:1636958_s_at:299:115; Interrogation_Position=1458; Antisense; AGCTTTACTACCTGAGGCTGCCTAA
>probe:Drosophila_2:1636958_s_at:567:455; Interrogation_Position=1504; Antisense; GATACTAATGGATGCCACCGTGGCC
>probe:Drosophila_2:1636958_s_at:477:331; Interrogation_Position=1564; Antisense; GCTGGATCACGATGTACCCGAGGAC
>probe:Drosophila_2:1636958_s_at:368:559; Interrogation_Position=1585; Antisense; GGACAACATTATCTTGGCCTCGCTT
>probe:Drosophila_2:1636958_s_at:216:579; Interrogation_Position=1600; Antisense; GGCCTCGCTTTTGATGGCTGAGATC
>probe:Drosophila_2:1636958_s_at:514:97; Interrogation_Position=1620; Antisense; AGATCGGTGTGCACTCCATTGCCTA
>probe:Drosophila_2:1636958_s_at:215:721; Interrogation_Position=1638; Antisense; TTGCCTATGCCTTCCCAAAGGTGAA
>probe:Drosophila_2:1636958_s_at:38:387; Interrogation_Position=1660; Antisense; GAAAATTGTTACTTCCGCTCTGGAT
>probe:Drosophila_2:1636958_s_at:278:345; Interrogation_Position=1719; Antisense; GCATTGGTAACTTTGGCGATCGCTA
>probe:Drosophila_2:1636958_s_at:231:581; Interrogation_Position=1732; Antisense; TGGCGATCGCTACTTTGGCACGGAA
>probe:Drosophila_2:1636958_s_at:159:585; Interrogation_Position=1747; Antisense; TGGCACGGAACCCTCTGATGAGTAC
>probe:Drosophila_2:1636958_s_at:195:551; Interrogation_Position=1775; Antisense; GGAGATCTGGGCCAATCCATACCTA

Paste this into a BLAST search page for me
AAAATATGCGGCGTCTCAATTCTCCGACCAATCTTAAGACCGGCGAGCCGAGCTTTACTACCTGAGGCTGCCTAAGATACTAATGGATGCCACCGTGGCCGCTGGATCACGATGTACCCGAGGACGGACAACATTATCTTGGCCTCGCTTGGCCTCGCTTTTGATGGCTGAGATCAGATCGGTGTGCACTCCATTGCCTATTGCCTATGCCTTCCCAAAGGTGAAGAAAATTGTTACTTCCGCTCTGGATGCATTGGTAACTTTGGCGATCGCTATGGCGATCGCTACTTTGGCACGGAATGGCACGGAACCCTCTGATGAGTACGGAGATCTGGGCCAATCCATACCTA

Full Affymetrix probeset data:

Annotations for 1636958_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720