FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637042_a_at:

>probe:Drosophila_2:1637042_a_at:386:163; Interrogation_Position=2168; Antisense; AAATTAATTGCGGATTGCCCCTATA
>probe:Drosophila_2:1637042_a_at:487:7; Interrogation_Position=2181; Antisense; ATTGCCCCTATATAATCAGCGTTGG
>probe:Drosophila_2:1637042_a_at:671:153; Interrogation_Position=2222; Antisense; ACAGTTTATGGATACCCGCATCGGA
>probe:Drosophila_2:1637042_a_at:188:341; Interrogation_Position=2239; Antisense; GCATCGGAACCTGTTCTTGGCGAGA
>probe:Drosophila_2:1637042_a_at:463:325; Interrogation_Position=2258; Antisense; GCGAGAATGTGCCAACCGTTTTATT
>probe:Drosophila_2:1637042_a_at:440:253; Interrogation_Position=2270; Antisense; CAACCGTTTTATTGCTCTCCAAGAA
>probe:Drosophila_2:1637042_a_at:314:503; Interrogation_Position=2301; Antisense; GTCGCCCACCAAAATTCGCTATGAA
>probe:Drosophila_2:1637042_a_at:580:167; Interrogation_Position=2324; Antisense; AAATGCAGCTAAGTGGACCCAATCA
>probe:Drosophila_2:1637042_a_at:680:695; Interrogation_Position=2359; Antisense; TTTATACAGCCCTTGAACGGAGCAA
>probe:Drosophila_2:1637042_a_at:331:73; Interrogation_Position=2408; Antisense; AGGCACCCTTACGTCTGAGCTTTGA
>probe:Drosophila_2:1637042_a_at:442:607; Interrogation_Position=2423; Antisense; TGAGCTTTGAGCCACCTTACTTCAT
>probe:Drosophila_2:1637042_a_at:93:385; Interrogation_Position=2520; Antisense; GAACTCTTCTACTCTGGAACTTGGG
>probe:Drosophila_2:1637042_a_at:663:571; Interrogation_Position=2543; Antisense; GGCTCGGAGGCCATTGGAACCATCA
>probe:Drosophila_2:1637042_a_at:630:9; Interrogation_Position=2649; Antisense; ATTCGAGAGCCGGATCTTCTAGAGA

Paste this into a BLAST search page for me
AAATTAATTGCGGATTGCCCCTATAATTGCCCCTATATAATCAGCGTTGGACAGTTTATGGATACCCGCATCGGAGCATCGGAACCTGTTCTTGGCGAGAGCGAGAATGTGCCAACCGTTTTATTCAACCGTTTTATTGCTCTCCAAGAAGTCGCCCACCAAAATTCGCTATGAAAAATGCAGCTAAGTGGACCCAATCATTTATACAGCCCTTGAACGGAGCAAAGGCACCCTTACGTCTGAGCTTTGATGAGCTTTGAGCCACCTTACTTCATGAACTCTTCTACTCTGGAACTTGGGGGCTCGGAGGCCATTGGAACCATCAATTCGAGAGCCGGATCTTCTAGAGA

Full Affymetrix probeset data:

Annotations for 1637042_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720