FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637060_a_at:

>probe:Drosophila_2:1637060_a_at:326:81; Interrogation_Position=2678; Antisense; AGGTGGCCAAATTGACGTAGGAGTC
>probe:Drosophila_2:1637060_a_at:303:1; Interrogation_Position=2787; Antisense; ATTTGCCTTACGCAATAGTTCCGCC
>probe:Drosophila_2:1637060_a_at:411:93; Interrogation_Position=2803; Antisense; AGTTCCGCCAACATGTAAATTCTTT
>probe:Drosophila_2:1637060_a_at:605:255; Interrogation_Position=2829; Antisense; CAAACTCTTGATTGACTTCGGGAAG
>probe:Drosophila_2:1637060_a_at:290:629; Interrogation_Position=2854; Antisense; TCCGTACTTCCGTTTTAATGTGAAT
>probe:Drosophila_2:1637060_a_at:672:355; Interrogation_Position=2888; Antisense; GCAAATTGGCGGTCGACAAACCCGT
>probe:Drosophila_2:1637060_a_at:456:229; Interrogation_Position=2922; Antisense; AATGGTTATTATGACTTTAGCGGAT
>probe:Drosophila_2:1637060_a_at:27:407; Interrogation_Position=2971; Antisense; GACGGAATGAAACCCGAATGCGTTT
>probe:Drosophila_2:1637060_a_at:23:369; Interrogation_Position=2986; Antisense; GAATGCGTTTCGTGGATTTTTTATA
>probe:Drosophila_2:1637060_a_at:228:1; Interrogation_Position=3022; Antisense; GTTAAACCCCTATACATTTCTATTG
>probe:Drosophila_2:1637060_a_at:1:661; Interrogation_Position=3080; Antisense; TAAGCCAAGGTATTTTTCAGACGCT
>probe:Drosophila_2:1637060_a_at:20:529; Interrogation_Position=3118; Antisense; GGGTTGAATTTTCCGCTAACTTGTG
>probe:Drosophila_2:1637060_a_at:141:277; Interrogation_Position=3133; Antisense; CTAACTTGTGGTGATAGCCGGTTTA
>probe:Drosophila_2:1637060_a_at:588:317; Interrogation_Position=3149; Antisense; GCCGGTTTATGAATGCTTATGACAA

Paste this into a BLAST search page for me
AGGTGGCCAAATTGACGTAGGAGTCATTTGCCTTACGCAATAGTTCCGCCAGTTCCGCCAACATGTAAATTCTTTCAAACTCTTGATTGACTTCGGGAAGTCCGTACTTCCGTTTTAATGTGAATGCAAATTGGCGGTCGACAAACCCGTAATGGTTATTATGACTTTAGCGGATGACGGAATGAAACCCGAATGCGTTTGAATGCGTTTCGTGGATTTTTTATAGTTAAACCCCTATACATTTCTATTGTAAGCCAAGGTATTTTTCAGACGCTGGGTTGAATTTTCCGCTAACTTGTGCTAACTTGTGGTGATAGCCGGTTTAGCCGGTTTATGAATGCTTATGACAA

Full Affymetrix probeset data:

Annotations for 1637060_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720