FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637061_at:

>probe:Drosophila_2:1637061_at:435:475; Interrogation_Position=574; Antisense; GTTAGGCAAGAAAGCTTCTCGAGAG
>probe:Drosophila_2:1637061_at:411:207; Interrogation_Position=585; Antisense; AAGCTTCTCGAGAGGACATGGCCGC
>probe:Drosophila_2:1637061_at:556:715; Interrogation_Position=589; Antisense; TTCTCGAGAGGACATGGCCGCCGCT
>probe:Drosophila_2:1637061_at:121:45; Interrogation_Position=619; Antisense; ATCGCCCACACAGATGGCCGGCAGT
>probe:Drosophila_2:1637061_at:349:153; Interrogation_Position=628; Antisense; ACAGATGGCCGGCAGTCAGGCGGGC
>probe:Drosophila_2:1637061_at:339:495; Interrogation_Position=642; Antisense; GTCAGGCGGGCGGTCAGATGCAGAT
>probe:Drosophila_2:1637061_at:539:495; Interrogation_Position=654; Antisense; GTCAGATGCAGATGGGCGGCGATCA
>probe:Drosophila_2:1637061_at:644:573; Interrogation_Position=668; Antisense; GGCGGCGATCAGCATATCACACTCA
>probe:Drosophila_2:1637061_at:273:575; Interrogation_Position=671; Antisense; GGCGATCAGCATATCACACTCATGG
>probe:Drosophila_2:1637061_at:688:453; Interrogation_Position=674; Antisense; GATCAGCATATCACACTCATGGAAG
>probe:Drosophila_2:1637061_at:383:685; Interrogation_Position=682; Antisense; TATCACACTCATGGAAGACCCCGAT
>probe:Drosophila_2:1637061_at:117:651; Interrogation_Position=684; Antisense; TCACACTCATGGAAGACCCCGATGT
>probe:Drosophila_2:1637061_at:656:145; Interrogation_Position=688; Antisense; ACTCATGGAAGACCCCGATGTCTGG
>probe:Drosophila_2:1637061_at:420:579; Interrogation_Position=693; Antisense; TGGAAGACCCCGATGTCTGGCGCCC

Paste this into a BLAST search page for me
GTTAGGCAAGAAAGCTTCTCGAGAGAAGCTTCTCGAGAGGACATGGCCGCTTCTCGAGAGGACATGGCCGCCGCTATCGCCCACACAGATGGCCGGCAGTACAGATGGCCGGCAGTCAGGCGGGCGTCAGGCGGGCGGTCAGATGCAGATGTCAGATGCAGATGGGCGGCGATCAGGCGGCGATCAGCATATCACACTCAGGCGATCAGCATATCACACTCATGGGATCAGCATATCACACTCATGGAAGTATCACACTCATGGAAGACCCCGATTCACACTCATGGAAGACCCCGATGTACTCATGGAAGACCCCGATGTCTGGTGGAAGACCCCGATGTCTGGCGCCC

Full Affymetrix probeset data:

Annotations for 1637061_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720