Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637118_at:

>probe:Drosophila_2:1637118_at:27:565; Interrogation_Position=151; Antisense; GGAATGCTCTTCCTGGACGATGCAA
>probe:Drosophila_2:1637118_at:613:385; Interrogation_Position=180; Antisense; GAAAAACTTCACCAGCTGCTTTAAG
>probe:Drosophila_2:1637118_at:25:93; Interrogation_Position=221; Antisense; AGTTCTTTTTCAACCGACTGCGGCT
>probe:Drosophila_2:1637118_at:442:199; Interrogation_Position=267; Antisense; AAGCGAATTTCCATACATTTCCCTC
>probe:Drosophila_2:1637118_at:380:19; Interrogation_Position=283; Antisense; ATTTCCCTCTGTGGCCGCGAAAGGA
>probe:Drosophila_2:1637118_at:578:535; Interrogation_Position=317; Antisense; GGTGCGATGACACACCTGTTGTGTT
>probe:Drosophila_2:1637118_at:209:557; Interrogation_Position=360; Antisense; GGACGATACGGAGGTGCTCAGCTAT
>probe:Drosophila_2:1637118_at:636:337; Interrogation_Position=375; Antisense; GCTCAGCTATGCACACGCGGGACAG
>probe:Drosophila_2:1637118_at:497:705; Interrogation_Position=414; Antisense; TTACGAACCCCACAAACTGTACATG
>probe:Drosophila_2:1637118_at:10:195; Interrogation_Position=428; Antisense; AACTGTACATGGATCCGCGAAACGG
>probe:Drosophila_2:1637118_at:559:563; Interrogation_Position=451; Antisense; GGAAGGGTCTATCATCCAGCTGCGC
>probe:Drosophila_2:1637118_at:265:565; Interrogation_Position=487; Antisense; GGAATAGGCCTAGTCCGCTCCAAAC
>probe:Drosophila_2:1637118_at:203:113; Interrogation_Position=530; Antisense; AGCACTTTGAGTTTCTCGCTGGCGA
>probe:Drosophila_2:1637118_at:75:669; Interrogation_Position=621; Antisense; TACTCAGCGATTTCCCATGAACGAG

Paste this into a BLAST search page for me
GGAATGCTCTTCCTGGACGATGCAAGAAAAACTTCACCAGCTGCTTTAAGAGTTCTTTTTCAACCGACTGCGGCTAAGCGAATTTCCATACATTTCCCTCATTTCCCTCTGTGGCCGCGAAAGGAGGTGCGATGACACACCTGTTGTGTTGGACGATACGGAGGTGCTCAGCTATGCTCAGCTATGCACACGCGGGACAGTTACGAACCCCACAAACTGTACATGAACTGTACATGGATCCGCGAAACGGGGAAGGGTCTATCATCCAGCTGCGCGGAATAGGCCTAGTCCGCTCCAAACAGCACTTTGAGTTTCTCGCTGGCGATACTCAGCGATTTCCCATGAACGAG

Full Affymetrix probeset data:

Annotations for 1637118_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime