FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637123_a_at:

>probe:Drosophila_2:1637123_a_at:93:287; Interrogation_Position=1002; Antisense; CGGCCGTAATTTTCGAGCAAGCTGG
>probe:Drosophila_2:1637123_a_at:300:581; Interrogation_Position=1047; Antisense; TGGCCGCCATCATAGTGGGTGTCAT
>probe:Drosophila_2:1637123_a_at:206:519; Interrogation_Position=1061; Antisense; GTGGGTGTCATCCAACTAATGGGCA
>probe:Drosophila_2:1637123_a_at:434:193; Interrogation_Position=1074; Antisense; AACTAATGGGCACCTATGCATCCAC
>probe:Drosophila_2:1637123_a_at:588:121; Interrogation_Position=1110; Antisense; AGCGACTGGGCCGTAAGATCCTGCT
>probe:Drosophila_2:1637123_a_at:537:335; Interrogation_Position=1132; Antisense; GCTCCTGGTCTCTGCGGTGGGAATC
>probe:Drosophila_2:1637123_a_at:635:605; Interrogation_Position=1171; Antisense; TGCGATGGGCACGTATAGCTACTTC
>probe:Drosophila_2:1637123_a_at:63:677; Interrogation_Position=1186; Antisense; TAGCTACTTCCAGATGCTCGGATGC
>probe:Drosophila_2:1637123_a_at:263:51; Interrogation_Position=1207; Antisense; ATGCCCAGTGGCATCGTTCAGCTGG
>probe:Drosophila_2:1637123_a_at:427:45; Interrogation_Position=1238; Antisense; ATCGCTGGGTTCTCCTTCATGCTGT
>probe:Drosophila_2:1637123_a_at:78:271; Interrogation_Position=1255; Antisense; CATGCTGTTCCTGGCTGCAGTCGGA
>probe:Drosophila_2:1637123_a_at:687:551; Interrogation_Position=1332; Antisense; GGAGCACGGCCATCATGATTCTAAT
>probe:Drosophila_2:1637123_a_at:264:463; Interrogation_Position=1348; Antisense; GATTCTAATGTCGACACTCTGGTTA
>probe:Drosophila_2:1637123_a_at:357:473; Interrogation_Position=1369; Antisense; GTTAATTTCCACCTGCGCCGTAAAG

Paste this into a BLAST search page for me
CGGCCGTAATTTTCGAGCAAGCTGGTGGCCGCCATCATAGTGGGTGTCATGTGGGTGTCATCCAACTAATGGGCAAACTAATGGGCACCTATGCATCCACAGCGACTGGGCCGTAAGATCCTGCTGCTCCTGGTCTCTGCGGTGGGAATCTGCGATGGGCACGTATAGCTACTTCTAGCTACTTCCAGATGCTCGGATGCATGCCCAGTGGCATCGTTCAGCTGGATCGCTGGGTTCTCCTTCATGCTGTCATGCTGTTCCTGGCTGCAGTCGGAGGAGCACGGCCATCATGATTCTAATGATTCTAATGTCGACACTCTGGTTAGTTAATTTCCACCTGCGCCGTAAAG

Full Affymetrix probeset data:

Annotations for 1637123_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720