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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637202_a_at:

>probe:Drosophila_2:1637202_a_at:64:251; Interrogation_Position=3217; Antisense; CAAGCGGCCAATGTTTGTTGTCCAT
>probe:Drosophila_2:1637202_a_at:582:603; Interrogation_Position=3232; Antisense; TGTTGTCCATTTCCTGCCACGAAAA
>probe:Drosophila_2:1637202_a_at:105:117; Interrogation_Position=3294; Antisense; AGCATTACAATCATCCAAGCCACAG
>probe:Drosophila_2:1637202_a_at:25:169; Interrogation_Position=3449; Antisense; AAAGGCTTCTTTTCACTGATAGCAC
>probe:Drosophila_2:1637202_a_at:573:591; Interrogation_Position=3495; Antisense; TGGTCCAGCCAGTTGATCCAATCTG
>probe:Drosophila_2:1637202_a_at:423:267; Interrogation_Position=3536; Antisense; CAGGGTGACCTCGTGGAAGATCTCC
>probe:Drosophila_2:1637202_a_at:214:637; Interrogation_Position=3563; Antisense; TCGACGCGTCTCCACGAACATAAAA
>probe:Drosophila_2:1637202_a_at:202:119; Interrogation_Position=3603; Antisense; AGCGATGCAGCGTTGTCCATGTCGA
>probe:Drosophila_2:1637202_a_at:170:505; Interrogation_Position=3617; Antisense; GTCCATGTCGATCTTGACCTCGAAT
>probe:Drosophila_2:1637202_a_at:276:607; Interrogation_Position=3685; Antisense; TGAGGAGCATGGCTTCCCTGCCGAA
>probe:Drosophila_2:1637202_a_at:92:627; Interrogation_Position=3715; Antisense; TGCCCCGTGCATAAGGTTCGGCAAT
>probe:Drosophila_2:1637202_a_at:315:541; Interrogation_Position=3729; Antisense; GGTTCGGCAATCATGATTTCCGCCT
>probe:Drosophila_2:1637202_a_at:483:729; Interrogation_Position=3760; Antisense; TTGGTATCTGGCTATCGGGATCTTG
>probe:Drosophila_2:1637202_a_at:563:375; Interrogation_Position=3791; Antisense; GAAGAGATTGGTGTCGCCCACCATG

Paste this into a BLAST search page for me
CAAGCGGCCAATGTTTGTTGTCCATTGTTGTCCATTTCCTGCCACGAAAAAGCATTACAATCATCCAAGCCACAGAAAGGCTTCTTTTCACTGATAGCACTGGTCCAGCCAGTTGATCCAATCTGCAGGGTGACCTCGTGGAAGATCTCCTCGACGCGTCTCCACGAACATAAAAAGCGATGCAGCGTTGTCCATGTCGAGTCCATGTCGATCTTGACCTCGAATTGAGGAGCATGGCTTCCCTGCCGAATGCCCCGTGCATAAGGTTCGGCAATGGTTCGGCAATCATGATTTCCGCCTTTGGTATCTGGCTATCGGGATCTTGGAAGAGATTGGTGTCGCCCACCATG

Full Affymetrix probeset data:

Annotations for 1637202_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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