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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637255_a_at:

>probe:Drosophila_2:1637255_a_at:477:553; Interrogation_Position=1438; Antisense; GGAGCTCCAGTATATTTCTATCGAT
>probe:Drosophila_2:1637255_a_at:393:457; Interrogation_Position=1460; Antisense; GATATGACTTCGACTCCGAGGAGCT
>probe:Drosophila_2:1637255_a_at:652:75; Interrogation_Position=1478; Antisense; AGGAGCTCATTTTTCCGTACCGCAT
>probe:Drosophila_2:1637255_a_at:2:647; Interrogation_Position=1532; Antisense; TCAGCCATGCCGACGATTTGAGCTA
>probe:Drosophila_2:1637255_a_at:186:691; Interrogation_Position=1548; Antisense; TTTGAGCTACCAATTCAGCAGCCTG
>probe:Drosophila_2:1637255_a_at:631:189; Interrogation_Position=1612; Antisense; AACATCGAACGAACCGTGGGCATCT
>probe:Drosophila_2:1637255_a_at:718:537; Interrogation_Position=1637; Antisense; GGACCCAGTTTGCTGCCACGGGTAA
>probe:Drosophila_2:1637255_a_at:233:259; Interrogation_Position=1653; Antisense; CACGGGTAATCCCTACAGCGAGAAG
>probe:Drosophila_2:1637255_a_at:407:557; Interrogation_Position=1689; Antisense; GGACACTCTGACCATTGATCCAGTT
>probe:Drosophila_2:1637255_a_at:555:601; Interrogation_Position=1704; Antisense; TGATCCAGTTCGCAAATCCGACGAG
>probe:Drosophila_2:1637255_a_at:588:235; Interrogation_Position=1718; Antisense; AATCCGACGAGGTCATCAAGTGCCT
>probe:Drosophila_2:1637255_a_at:355:651; Interrogation_Position=1733; Antisense; TCAAGTGCCTCAACATCAGTGATGA
>probe:Drosophila_2:1637255_a_at:464:217; Interrogation_Position=1762; Antisense; AAGTTCATCGATCTGCCTGAGTGGC
>probe:Drosophila_2:1637255_a_at:256:529; Interrogation_Position=1802; Antisense; GGGAGAGCCTCTATGACGACAACAA

Paste this into a BLAST search page for me
GGAGCTCCAGTATATTTCTATCGATGATATGACTTCGACTCCGAGGAGCTAGGAGCTCATTTTTCCGTACCGCATTCAGCCATGCCGACGATTTGAGCTATTTGAGCTACCAATTCAGCAGCCTGAACATCGAACGAACCGTGGGCATCTGGACCCAGTTTGCTGCCACGGGTAACACGGGTAATCCCTACAGCGAGAAGGGACACTCTGACCATTGATCCAGTTTGATCCAGTTCGCAAATCCGACGAGAATCCGACGAGGTCATCAAGTGCCTTCAAGTGCCTCAACATCAGTGATGAAAGTTCATCGATCTGCCTGAGTGGCGGGAGAGCCTCTATGACGACAACAA

Full Affymetrix probeset data:

Annotations for 1637255_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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