FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637301_a_at:

>probe:Drosophila_2:1637301_a_at:221:569; Interrogation_Position=4069; Antisense; GGCAGAGCAGCGCATTTTTGGCAAC
>probe:Drosophila_2:1637301_a_at:648:359; Interrogation_Position=4089; Antisense; GCAACGCATCCACAACTACATATTG
>probe:Drosophila_2:1637301_a_at:725:457; Interrogation_Position=4120; Antisense; GATATTTGATACTCGCGACAAGGCG
>probe:Drosophila_2:1637301_a_at:479:283; Interrogation_Position=4241; Antisense; CGACCATAACTTGCGTGCCATTAAA
>probe:Drosophila_2:1637301_a_at:706:505; Interrogation_Position=4255; Antisense; GTGCCATTAAATGCGCTGCTCTGCT
>probe:Drosophila_2:1637301_a_at:19:337; Interrogation_Position=4269; Antisense; GCTGCTCTGCTCTTTTATGTGTGTG
>probe:Drosophila_2:1637301_a_at:666:441; Interrogation_Position=4298; Antisense; GATGCGGCTCGGTGTATTTTGTCCA
>probe:Drosophila_2:1637301_a_at:573:513; Interrogation_Position=4309; Antisense; GTGTATTTTGTCCATCCCAACTAAC
>probe:Drosophila_2:1637301_a_at:359:97; Interrogation_Position=4371; Antisense; AGATCAACGTCGACGGCAATGCCGC
>probe:Drosophila_2:1637301_a_at:668:107; Interrogation_Position=4439; Antisense; AGAACTTTAGCCCTGATATCCATCG
>probe:Drosophila_2:1637301_a_at:639:637; Interrogation_Position=4461; Antisense; TCGTTCAACTGCCAACTGATTGCTT
>probe:Drosophila_2:1637301_a_at:204:259; Interrogation_Position=4488; Antisense; CACATCATTCCGTATGCCTTTTTAG
>probe:Drosophila_2:1637301_a_at:701:691; Interrogation_Position=4575; Antisense; TTTGTATCCTTGTTTATCCCTATTA
>probe:Drosophila_2:1637301_a_at:609:727; Interrogation_Position=4602; Antisense; TTGTAATCAACATTGTGTGCCCCAA

Paste this into a BLAST search page for me
GGCAGAGCAGCGCATTTTTGGCAACGCAACGCATCCACAACTACATATTGGATATTTGATACTCGCGACAAGGCGCGACCATAACTTGCGTGCCATTAAAGTGCCATTAAATGCGCTGCTCTGCTGCTGCTCTGCTCTTTTATGTGTGTGGATGCGGCTCGGTGTATTTTGTCCAGTGTATTTTGTCCATCCCAACTAACAGATCAACGTCGACGGCAATGCCGCAGAACTTTAGCCCTGATATCCATCGTCGTTCAACTGCCAACTGATTGCTTCACATCATTCCGTATGCCTTTTTAGTTTGTATCCTTGTTTATCCCTATTATTGTAATCAACATTGTGTGCCCCAA

Full Affymetrix probeset data:

Annotations for 1637301_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720