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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637410_s_at:

>probe:Drosophila_2:1637410_s_at:178:727; Interrogation_Position=4594; Antisense; TTGTTGTATCAAATCCTCAATAAGA
>probe:Drosophila_2:1637410_s_at:633:5; Interrogation_Position=4678; Antisense; ATTGCAAACTTTTTTAGCACGAAAT
>probe:Drosophila_2:1637410_s_at:285:245; Interrogation_Position=4714; Antisense; AATTCTTTGGCTAATACGTCAGTTA
>probe:Drosophila_2:1637410_s_at:658:571; Interrogation_Position=4744; Antisense; GGCTACATTTTGATGATACTCACAA
>probe:Drosophila_2:1637410_s_at:363:493; Interrogation_Position=4771; Antisense; GTAATTTTTGCATTCTACACAGGTG
>probe:Drosophila_2:1637410_s_at:247:491; Interrogation_Position=4856; Antisense; GTAAGTTAATGAGCCTTCAAGTACT
>probe:Drosophila_2:1637410_s_at:503:53; Interrogation_Position=4864; Antisense; ATGAGCCTTCAAGTACTTTAGTACA
>probe:Drosophila_2:1637410_s_at:113:393; Interrogation_Position=4907; Antisense; GAAATCCTACGGCTTTATATTCAAT
>probe:Drosophila_2:1637410_s_at:421:9; Interrogation_Position=4948; Antisense; ATTCCTGACGATTTGTAGTAATTGT
>probe:Drosophila_2:1637410_s_at:463:483; Interrogation_Position=4962; Antisense; GTAGTAATTGTTTTGTTCTTAGCTT
>probe:Drosophila_2:1637410_s_at:144:473; Interrogation_Position=4976; Antisense; GTTCTTAGCTTTTTTGCATTCTCCT
>probe:Drosophila_2:1637410_s_at:582:697; Interrogation_Position=4985; Antisense; TTTTTTGCATTCTCCTCCGTTACTC
>probe:Drosophila_2:1637410_s_at:619:627; Interrogation_Position=5000; Antisense; TCCGTTACTCCGTTACTCGTATAGT
>probe:Drosophila_2:1637410_s_at:132:283; Interrogation_Position=5059; Antisense; CGTTGAGAAGTATGTTACAGGCAGA

Paste this into a BLAST search page for me
TTGTTGTATCAAATCCTCAATAAGAATTGCAAACTTTTTTAGCACGAAATAATTCTTTGGCTAATACGTCAGTTAGGCTACATTTTGATGATACTCACAAGTAATTTTTGCATTCTACACAGGTGGTAAGTTAATGAGCCTTCAAGTACTATGAGCCTTCAAGTACTTTAGTACAGAAATCCTACGGCTTTATATTCAATATTCCTGACGATTTGTAGTAATTGTGTAGTAATTGTTTTGTTCTTAGCTTGTTCTTAGCTTTTTTGCATTCTCCTTTTTTTGCATTCTCCTCCGTTACTCTCCGTTACTCCGTTACTCGTATAGTCGTTGAGAAGTATGTTACAGGCAGA

Full Affymetrix probeset data:

Annotations for 1637410_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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