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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637411_s_at:

>probe:Drosophila_2:1637411_s_at:195:31; Interrogation_Position=1036; Antisense; ATAACTTCCGGACTTCGATAACTAT
>probe:Drosophila_2:1637411_s_at:219:395; Interrogation_Position=1067; Antisense; GAAATGTTGGATTCGCTTTCGAGAT
>probe:Drosophila_2:1637411_s_at:684:503; Interrogation_Position=1127; Antisense; GTCCGACTCAATTACTGCCGAAATT
>probe:Drosophila_2:1637411_s_at:24:319; Interrogation_Position=1143; Antisense; GCCGAAATTAACTTACCTACATCTT
>probe:Drosophila_2:1637411_s_at:319:183; Interrogation_Position=1184; Antisense; AACAACATACCGTGATTTACTAAGT
>probe:Drosophila_2:1637411_s_at:432:709; Interrogation_Position=1237; Antisense; TTAATGGCGATTGACCAACCAATAT
>probe:Drosophila_2:1637411_s_at:704:499; Interrogation_Position=1278; Antisense; GTCTGACATGGCTAAATTCTAAATC
>probe:Drosophila_2:1637411_s_at:546:387; Interrogation_Position=774; Antisense; GAAAATGCGCGTGGCCGATTTTTAC
>probe:Drosophila_2:1637411_s_at:708:457; Interrogation_Position=790; Antisense; GATTTTTACGGGTATCGCAAACAAT
>probe:Drosophila_2:1637411_s_at:522:523; Interrogation_Position=825; Antisense; GGGCCTAGATCTCAAATCGCTTTAC
>probe:Drosophila_2:1637411_s_at:628:697; Interrogation_Position=845; Antisense; TTTACCGGCTCAAGGCATGATCGAG
>probe:Drosophila_2:1637411_s_at:647:347; Interrogation_Position=859; Antisense; GCATGATCGAGTTTCGTGACGCTCT
>probe:Drosophila_2:1637411_s_at:458:511; Interrogation_Position=874; Antisense; GTGACGCTCTTACAGATTTGTTAGA
>probe:Drosophila_2:1637411_s_at:374:427; Interrogation_Position=931; Antisense; GAGATTTACCGGAAGAGCGACACAT

Paste this into a BLAST search page for me
ATAACTTCCGGACTTCGATAACTATGAAATGTTGGATTCGCTTTCGAGATGTCCGACTCAATTACTGCCGAAATTGCCGAAATTAACTTACCTACATCTTAACAACATACCGTGATTTACTAAGTTTAATGGCGATTGACCAACCAATATGTCTGACATGGCTAAATTCTAAATCGAAAATGCGCGTGGCCGATTTTTACGATTTTTACGGGTATCGCAAACAATGGGCCTAGATCTCAAATCGCTTTACTTTACCGGCTCAAGGCATGATCGAGGCATGATCGAGTTTCGTGACGCTCTGTGACGCTCTTACAGATTTGTTAGAGAGATTTACCGGAAGAGCGACACAT

Full Affymetrix probeset data:

Annotations for 1637411_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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