FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637517_s_at:

>probe:Drosophila_2:1637517_s_at:466:411; Interrogation_Position=3513; Antisense; GACGCTGGCGGCAAGAATAGCATTA
>probe:Drosophila_2:1637517_s_at:497:53; Interrogation_Position=3540; Antisense; AGTACGTTTAGGAACCTGCAGGTGT
>probe:Drosophila_2:1637517_s_at:51:499; Interrogation_Position=3568; Antisense; GTCTGCCACAGCATGCACAGCAATT
>probe:Drosophila_2:1637517_s_at:556:609; Interrogation_Position=3613; Antisense; TGACTGTTAGTTTCGCCACCAAGGA
>probe:Drosophila_2:1637517_s_at:317:321; Interrogation_Position=3723; Antisense; GCCCGTTTGATTTGCTCACCGAAAC
>probe:Drosophila_2:1637517_s_at:476:389; Interrogation_Position=3743; Antisense; GAAACAATCGCATCCAGTGCCACTG
>probe:Drosophila_2:1637517_s_at:497:87; Interrogation_Position=3758; Antisense; AGTGCCACTGCGAGTGTACATTGAT
>probe:Drosophila_2:1637517_s_at:323:77; Interrogation_Position=3790; Antisense; AGTGGACGGGAGTCAAGTTCTTCCA
>probe:Drosophila_2:1637517_s_at:689:91; Interrogation_Position=3805; Antisense; AGTTCTTCCAAGTATCGTCGCAATG
>probe:Drosophila_2:1637517_s_at:53:501; Interrogation_Position=3821; Antisense; GTCGCAATGGCAAACGCACGTCAAG
>probe:Drosophila_2:1637517_s_at:258:495; Interrogation_Position=3840; Antisense; GTCAAGAACTTTCCGATTGCGCTCA
>probe:Drosophila_2:1637517_s_at:537:145; Interrogation_Position=3873; Antisense; ACTCCCATGTCCTGTGCTGAATTAT
>probe:Drosophila_2:1637517_s_at:388:179; Interrogation_Position=3970; Antisense; AAAAACTGAAATGTGCTCGGAGCAA
>probe:Drosophila_2:1637517_s_at:530:415; Interrogation_Position=3997; Antisense; GAGCCAGTCACTTGCGCGGCAATAA

Paste this into a BLAST search page for me
GACGCTGGCGGCAAGAATAGCATTAAGTACGTTTAGGAACCTGCAGGTGTGTCTGCCACAGCATGCACAGCAATTTGACTGTTAGTTTCGCCACCAAGGAGCCCGTTTGATTTGCTCACCGAAACGAAACAATCGCATCCAGTGCCACTGAGTGCCACTGCGAGTGTACATTGATAGTGGACGGGAGTCAAGTTCTTCCAAGTTCTTCCAAGTATCGTCGCAATGGTCGCAATGGCAAACGCACGTCAAGGTCAAGAACTTTCCGATTGCGCTCAACTCCCATGTCCTGTGCTGAATTATAAAAACTGAAATGTGCTCGGAGCAAGAGCCAGTCACTTGCGCGGCAATAA

Full Affymetrix probeset data:

Annotations for 1637517_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720