FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637582_a_at:

>probe:Drosophila_2:1637582_a_at:531:423; Interrogation_Position=3360; Antisense; GAGAGAAGAATCCAAACTAACTATT
>probe:Drosophila_2:1637582_a_at:289:481; Interrogation_Position=3403; Antisense; GTATATCTTGTATGTATATGCAGAG
>probe:Drosophila_2:1637582_a_at:193:603; Interrogation_Position=3443; Antisense; TGTTATTTTTATGCGCTATTCCTCT
>probe:Drosophila_2:1637582_a_at:456:703; Interrogation_Position=3451; Antisense; TTATGCGCTATTCCTCTATACGTGC
>probe:Drosophila_2:1637582_a_at:324:685; Interrogation_Position=3467; Antisense; TATACGTGCCCACAGCAAAGAACTA
>probe:Drosophila_2:1637582_a_at:318:161; Interrogation_Position=3565; Antisense; AAATTTTCTATTCTGTATAACTGTA
>probe:Drosophila_2:1637582_a_at:329:483; Interrogation_Position=3579; Antisense; GTATAACTGTATGTGTATTCGTAAT
>probe:Drosophila_2:1637582_a_at:536:59; Interrogation_Position=3611; Antisense; ATGTTAGTTCGTAAAATCGCTCTTT
>probe:Drosophila_2:1637582_a_at:512:641; Interrogation_Position=3770; Antisense; TCTGCAAAAGGAGGCCTATATGATA
>probe:Drosophila_2:1637582_a_at:69:453; Interrogation_Position=3791; Antisense; GATAATATGATTATTGACCGATCGG
>probe:Drosophila_2:1637582_a_at:604:609; Interrogation_Position=3805; Antisense; TGACCGATCGGAAGTCTATCAAAAT
>probe:Drosophila_2:1637582_a_at:536:675; Interrogation_Position=3855; Antisense; TAGAAAGCAAGGACTGGAACTTCTG
>probe:Drosophila_2:1637582_a_at:574:585; Interrogation_Position=3869; Antisense; TGGAACTTCTGCTATGAAGCCAGGA
>probe:Drosophila_2:1637582_a_at:92:677; Interrogation_Position=3881; Antisense; TATGAAGCCAGGAGCCACACAAAGA

Paste this into a BLAST search page for me
GAGAGAAGAATCCAAACTAACTATTGTATATCTTGTATGTATATGCAGAGTGTTATTTTTATGCGCTATTCCTCTTTATGCGCTATTCCTCTATACGTGCTATACGTGCCCACAGCAAAGAACTAAAATTTTCTATTCTGTATAACTGTAGTATAACTGTATGTGTATTCGTAATATGTTAGTTCGTAAAATCGCTCTTTTCTGCAAAAGGAGGCCTATATGATAGATAATATGATTATTGACCGATCGGTGACCGATCGGAAGTCTATCAAAATTAGAAAGCAAGGACTGGAACTTCTGTGGAACTTCTGCTATGAAGCCAGGATATGAAGCCAGGAGCCACACAAAGA

Full Affymetrix probeset data:

Annotations for 1637582_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720