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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637629_a_at:

>probe:Drosophila_2:1637629_a_at:197:321; Interrogation_Position=4184; Antisense; GCCCGCTTTCGACCATTTTGTGTTT
>probe:Drosophila_2:1637629_a_at:101:701; Interrogation_Position=4208; Antisense; TTTTGTCCAACAATCGAACACCACC
>probe:Drosophila_2:1637629_a_at:556:35; Interrogation_Position=4251; Antisense; ATCATGCCTCGTGTTTGTTGTCTTG
>probe:Drosophila_2:1637629_a_at:3:463; Interrogation_Position=4267; Antisense; GTTGTCTTGTTGTGTAAGGCGTCCA
>probe:Drosophila_2:1637629_a_at:262:227; Interrogation_Position=4282; Antisense; AAGGCGTCCATGAAAGCTTCTAAAG
>probe:Drosophila_2:1637629_a_at:266:343; Interrogation_Position=4297; Antisense; GCTTCTAAAGATCTTGTGTCTGCAA
>probe:Drosophila_2:1637629_a_at:512:685; Interrogation_Position=4473; Antisense; TATACGTCATCGTCTTGTCTTGTGA
>probe:Drosophila_2:1637629_a_at:278:727; Interrogation_Position=4487; Antisense; TTGTCTTGTGAGTGTCCCTGTGCCG
>probe:Drosophila_2:1637629_a_at:386:625; Interrogation_Position=4560; Antisense; TGCCCTCCGTTTTTACCAGATTTGT
>probe:Drosophila_2:1637629_a_at:650:481; Interrogation_Position=4583; Antisense; GTATTTGCAGCCTTATCCACATGAT
>probe:Drosophila_2:1637629_a_at:711:717; Interrogation_Position=4615; Antisense; TTCCGCTACTCTTGGGCGGAGTACA
>probe:Drosophila_2:1637629_a_at:493:91; Interrogation_Position=4689; Antisense; AGTTCCCACCTTGAACACTTGTATT
>probe:Drosophila_2:1637629_a_at:113:701; Interrogation_Position=4712; Antisense; TTTTTTGCCATTTATCAGACCACAT
>probe:Drosophila_2:1637629_a_at:331:63; Interrogation_Position=4751; Antisense; ATGTGTAATCCAATTTCGAGCGCAA

Paste this into a BLAST search page for me
GCCCGCTTTCGACCATTTTGTGTTTTTTTGTCCAACAATCGAACACCACCATCATGCCTCGTGTTTGTTGTCTTGGTTGTCTTGTTGTGTAAGGCGTCCAAAGGCGTCCATGAAAGCTTCTAAAGGCTTCTAAAGATCTTGTGTCTGCAATATACGTCATCGTCTTGTCTTGTGATTGTCTTGTGAGTGTCCCTGTGCCGTGCCCTCCGTTTTTACCAGATTTGTGTATTTGCAGCCTTATCCACATGATTTCCGCTACTCTTGGGCGGAGTACAAGTTCCCACCTTGAACACTTGTATTTTTTTTGCCATTTATCAGACCACATATGTGTAATCCAATTTCGAGCGCAA

Full Affymetrix probeset data:

Annotations for 1637629_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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