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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637638_s_at:

>probe:Drosophila_2:1637638_s_at:481:489; Interrogation_Position=3559; Antisense; GTACATTATGCGCTTCGAGGAGCCT
>probe:Drosophila_2:1637638_s_at:111:211; Interrogation_Position=3584; Antisense; AAGAAGCCCAATGGCCTGGTGACCA
>probe:Drosophila_2:1637638_s_at:197:193; Interrogation_Position=3608; Antisense; AACTACGTAATCCACTTTCGCAACA
>probe:Drosophila_2:1637638_s_at:302:633; Interrogation_Position=3638; Antisense; TCGCAAACCCACGTCGGGTGTGTAA
>probe:Drosophila_2:1637638_s_at:710:547; Interrogation_Position=3666; Antisense; GGATGGATCACCAGAGTGCCGGCTA
>probe:Drosophila_2:1637638_s_at:418:99; Interrogation_Position=3678; Antisense; AGAGTGCCGGCTACATGTACGTGAA
>probe:Drosophila_2:1637638_s_at:458:239; Interrogation_Position=3781; Antisense; AATCAGCCTGTGCAGCGACGAGGAC
>probe:Drosophila_2:1637638_s_at:48:667; Interrogation_Position=3810; Antisense; TACAGGCGTTTCACAGCAGGGAGGC
>probe:Drosophila_2:1637638_s_at:208:107; Interrogation_Position=3850; Antisense; AGAAATCACAGACTTGCCAGCCACA
>probe:Drosophila_2:1637638_s_at:505:319; Interrogation_Position=3885; Antisense; GCCGCGGCATTAGCATATTCCTGAT
>probe:Drosophila_2:1637638_s_at:484:21; Interrogation_Position=3899; Antisense; ATATTCCTGATCTGCTTCCTGTTTG
>probe:Drosophila_2:1637638_s_at:532:483; Interrogation_Position=3932; Antisense; GTATCGCTGGTTTGGGTTCTTTACA
>probe:Drosophila_2:1637638_s_at:548:323; Interrogation_Position=4047; Antisense; GCGAAATCCTTGTCGACGGTTTTGA
>probe:Drosophila_2:1637638_s_at:189:315; Interrogation_Position=4101; Antisense; GCCAGGCGGACGATTATCCCATGTA

Paste this into a BLAST search page for me
GTACATTATGCGCTTCGAGGAGCCTAAGAAGCCCAATGGCCTGGTGACCAAACTACGTAATCCACTTTCGCAACATCGCAAACCCACGTCGGGTGTGTAAGGATGGATCACCAGAGTGCCGGCTAAGAGTGCCGGCTACATGTACGTGAAAATCAGCCTGTGCAGCGACGAGGACTACAGGCGTTTCACAGCAGGGAGGCAGAAATCACAGACTTGCCAGCCACAGCCGCGGCATTAGCATATTCCTGATATATTCCTGATCTGCTTCCTGTTTGGTATCGCTGGTTTGGGTTCTTTACAGCGAAATCCTTGTCGACGGTTTTGAGCCAGGCGGACGATTATCCCATGTA

Full Affymetrix probeset data:

Annotations for 1637638_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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